RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 DRD2P14416 443 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 CRYZQ08257 329 aaKnown RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 OTOP2Q7RTS6 562 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 KBTBD6Q86V97 674 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 C12orf45Q8N5I9 185 aaPredicted RBP16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 OR1S1Q8NH92 325 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 TM9SF4Q92544 642 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 C1orf74Q96LT6 269 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 FEVQ99581 238 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 MMP28Q9H239 520 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 COQ3Q9NZJ6 369 aa16.06■□□□□ 0.16
SMCHD1-201ENST00000320876 VEGFDO43915 354 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 FOXD2O60548 495 aaPredicted RBP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 HES5Q5TA89 166 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 DPY19L4Q7Z388 723 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 ASPGQ86U10 573 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 OR2M4Q96R27 311 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 MFFQ9GZY8 342 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 MRC1P22897 1456 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 hCG_1807616A0A1W2PRN6 198 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 KDELR2P33947 212 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 HNRNPKP61978 463 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 IL13RA1P78552 427 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 MMABQ96EY8 250 aaPredicted RBP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 PRMT8Q9NR22 394 aaPredicted RBP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 PRTFDC1Q9NRG1 225 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 SDHDO14521 159 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 KNG1P01042 644 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 RELAQ04206 551 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 MICAQ29983 383 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 FBXO7Q9Y3I1 522 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 MED1Q15648 1581 aaPredicted RBP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 TMEM115Q12893 351 aaPredicted RBP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 GRB7Q14451 532 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 C6orf120Q7Z4R8 191 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 BPIP17213 487 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 SLC2A5P22732 501 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 TBPL1P62380 186 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 FAM205BPQ63HN1 556 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 PLBD1Q6P4A8 553 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 IFNL1Q8IU54 200 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 TEX51A0A1B0GUA7 166 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 ID2Q02363 134 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 ZFP41Q8N8Y5 198 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 KLRG1Q96E93 195 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 ZBED3Q96IU2 234 aaPredicted RBP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 SGSHP51688 502 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 UNC5DQ6UXZ4 953 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 DAZLQ92904 295 aaKnown RBP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 SNX18Q96RF0 628 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 RANBP9Q96S59 729 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 DPH2Q9BQC3 489 aaPredicted RBP16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 SLC38A1Q9H2H9 487 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 MINDY3Q9H8M7 445 aa16.05■□□□□ 0.16
SMCHD1-201ENST00000320876 ZFC3H1O60293 1989 aaKnown RBP16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 CDC123O75794 336 aaPredicted RBP16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 CFIP05156 583 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 GALTP07902 379 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 PLCXD2Q0VAA5 305 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 IL17RCQ8NAC3 791 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 SIGLEC10Q96LC7 697 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 NPAP1Q9NZP6 1156 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 PNMTP11086 282 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 NKPD1Q17RQ9 610 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 LRRC28Q86X40 367 aaPredicted RBP16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 CPNE8Q86YQ8 564 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 METTL4Q8N3J2 472 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 DCAF4L2Q8NA75 395 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 ZNF461Q8TAF7 563 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 SDHAF2Q9NX18 166 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 LOC285095A0A1B0GVY8 99 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 A8MU76 341 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 PLAG1Q6DJT9 500 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 GON7Q9BXV9 100 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 SLC25A31Q9H0C2 315 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 EFCAB7A8K855 629 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 TYRP14679 529 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 JUPP14923 745 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 RTL6Q6ICC9 239 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 GTF2H4Q92759 462 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 TMEM98Q9Y2Y6 226 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 GGT3PA6NGU5 568 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 TXNL1O43396 289 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 PGCP20142 388 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 RPL23AP62750 156 aaKnown RBP16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 GPR50Q13585 617 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 MANEALQ5VSG8 457 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 MSLNLQ96KJ4 702 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 SYT7O43581 403 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 OSMP13725 252 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 IL32P24001 234 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 GSTM4Q03013 218 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 INCA1Q0VD86 236 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 EOGTQ5NDL2 527 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 LEG1Q6P5S2 330 aa16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMCHD1-201ENST00000320876 OR4D6Q8NGJ1 314 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms