RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MANEAQ5SRI9 462 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 HEPHL1Q6MZM0 1159 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 FRRS1Q6ZNA5 592 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 RRM2BQ7LG56 351 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 BCDIN3DQ7Z5W3 292 aaKnown RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 TCEANCQ8N8B7 351 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 MORN4Q8NDC4 146 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 OR9A4Q8NGU2 314 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ZNF675Q8TD23 568 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 FCGR1BQ92637 280 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SLC38A4Q969I6 547 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 RBCK1Q9BYM8 510 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SEMA6CQ9H3T2 930 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 MTHFD2LQ9H903 347 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 PLGRKTQ9HBL7 147 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 TVP23BQ9NYZ1 205 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 POMT2Q9UKY4 750 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SH3D21A4FU49 640 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SYT5O00445 386 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 RDH16O75452 317 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 UBXN7O94888 489 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 PTHP01270 115 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ATP1B1P05026 303 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CD38P28907 300 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 TGFBR1P36897 503 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 TEKQ02763 1124 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 COX10Q12887 443 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SRSF5Q13243 272 aaKnown RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 ZNF628Q5EBL2 1059 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SLX4IPQ5VYV7 408 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 C1orf94Q6P1W5 598 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 LSRQ86X29 649 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 PEX5LQ8IYB4 626 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CA13Q8N1Q1 262 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 LMX1AQ8TE12 382 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 PIK3R3Q92569 461 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 LGALS12Q96DT0 336 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SDF2Q99470 211 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 FOXQ1Q9C009 403 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 NECTIN3Q9NQS3 549 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SEMA4GQ9NTN9 838 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 DNAJC27Q9NZQ0 273 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ZNF232Q9UNY5 417 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 C19orf53Q9UNZ5 99 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 NTNG1Q9Y2I2 539 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 FANCMQ8IYD8 2048 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CENPVL1A0A0U1RR11 272 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 FAM170BA6NMN3 283 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 M0R082 166 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 AP3D1O14617 1153 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 TLX2O43763 284 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 CDC123O75794 336 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 AGR2O95994 175 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CSF2P04141 144 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 TP53P04637 393 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 ADRA2AP08913 450 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ADORA3P0DMS8 318 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ACP2P11117 423 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 PRKAR1BP31321 381 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 IFNA8P32881 189 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 GIPRP48546 466 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 RNF144AP50876 292 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 EXOSC7Q15024 291 aaKnown RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 MOGQ16653 247 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ZNF829Q3KNS6 432 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 ARHGAP11BQ3KRB8 267 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ANKDD1AQ495B1 522 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 AP1ARQ63HQ0 302 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 TYW3Q6IPR3 259 aaKnown RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 ZNF730Q6ZMV8 503 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 SLCO6A1Q86UG4 719 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 C11orf74Q86VG3 221 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 MCATQ8IVS2 390 aaKnown RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 RBM12BQ8IXT5 1001 aaKnown RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 ZNF687Q8N1G0 1237 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 ARL14Q8N4G2 192 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 C19orf47Q8N9M1 422 aaKnown RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 MAP3K3Q99759 626 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 PIGUQ9H490 435 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 TRIM45Q9H8W5 580 aaPredicted RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 CACYBPQ9HB71 228 aaKnown RBP7.07□□□□□ -1.28
IFT88-201ENST00000319980 ANKHQ9HCJ1 492 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 CNIH4Q9P003 139 aa7.07□□□□□ -1.28
IFT88-201ENST00000319980 A0A0A6YYC8 382 aaPredicted RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 EFCAB10A6NFE3 127 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 METTL12A8MUP2 240 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 EFCAB9A8MZ26 197 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 I3L1I5 382 aaPredicted RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 TNFRSF10AO00220 468 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 CNOT3O75175 753 aaKnown RBP7.06□□□□□ -1.28
IFT88-201ENST00000319980 SLITRK5O94991 958 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 INHBBP09529 407 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 CT62P0C5K7 136 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 PTNP21246 168 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 CD27P26842 260 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 NUDT1P36639 197 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 TGFBR2P37173 567 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 RFX3P48380 749 aa7.06□□□□□ -1.28
IFT88-201ENST00000319980 CLK1P49759 484 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms