RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ANKRD11Q6UB99 2663 aaPredicted RBP14.24□□□□□ -0.13
PDLIM5-202ENST00000318007 CENPVL1A0A0U1RR11 272 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 TMEM200CA6NKL6 621 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 CXCR6O00574 342 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ARPC2O15144 300 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 KCNK2O95069 426 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ZIC2O95409 532 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 HPP00738 406 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 TFPTP0C1Z6 253 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ITPKBP27987 946 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 POU6F2P78424 691 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 CHRNEQ04844 493 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 FLOT2Q14254 428 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 DEFB109BQ30KR1 87 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 GLYATQ6IB77 296 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 PGM2L1Q6PCE3 622 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 SPACA3Q8IXA5 215 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ZSCAN1Q8NBB4 408 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 BHLHE22Q8NFJ8 381 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 FAM162AQ96A26 154 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ARSGQ96EG1 525 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 LCORQ96JN0 433 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ADOQ96SZ5 270 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 TREX2Q9BQ50 279 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 LMF2Q9BU23 707 aaKnown RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ZBTB20Q9HC78 741 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 EXD2Q9NVH0 621 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 CBLCQ9ULV8 474 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 GPR55Q9Y2T6 319 aaPredicted RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 TMEM247A6NEH6 219 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 DUXAA6NLW8 204 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ZFAND5O76080 213 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ARAFP10398 606 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 HSD17B1P14061 328 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 ATP6V1B2P21281 511 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 MRPS22P82650 360 aaKnown RBP14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 PLCXD2Q0VAA5 305 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 BCORP1Q8N888 145 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 FAM13CQ8NE31 585 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 MIPOL1Q8TD10 442 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 EFHD1Q9BUP0 239 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 CDCP1Q9H5V8 836 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 FLRT3Q9NZU0 649 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 MYOTQ9UBF9 498 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 CFL2Q9Y281 166 aa14.23□□□□□ -0.13
PDLIM5-202ENST00000318007 SYNDIG1LA6NDD5 238 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 CLDN24A6NM45 220 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 ITGA10O75578 1167 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 CIB2O75838 187 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 NKX2-2O95096 273 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 ABCD3P28288 659 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 PPICP45877 212 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 ANXA11P50995 505 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 CDC20Q12834 499 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 TRIM25Q14258 630 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 KPNB1Q14974 876 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 C7orf57Q8NEG2 295 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 ASB9Q96DX5 294 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 BTBD9Q96Q07 612 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 RAB3IPQ96QF0 476 aaPredicted RBP14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 ING2Q9H160 280 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 MMP25Q9NPA2 562 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 DUSP22Q9NRW4 184 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 MED13Q9UHV7 2174 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 URB1O60287 2271 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 OR6C76A6NM76 312 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 GMFGO60234 142 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 REM1O75628 298 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 ZNF682O95780 498 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 SERPINA1P01009 418 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 GGT1P19440 569 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 MAP3K8P41279 467 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 CRISP3P54108 245 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 CCDC81Q6ZN84 652 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 DHFR2Q86XF0 187 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 SNIP1Q8TAD8 396 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 M1APQ8TC57 530 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 TPD52L3Q96J77 140 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 COL21A1Q96P44 957 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 STACQ99469 402 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 SDF2Q99470 211 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 BTBD2Q9BX70 525 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 TMEM38AQ9H6F2 299 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 A4GALTQ9NPC4 353 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 SUCOQ9UBS9 1254 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 PPIEQ9UNP9 301 aaKnown RBP14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 ANGPT4Q9Y264 503 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 WDR45Q9Y484 360 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 SNX13Q9Y5W8 968 aa14.22□□□□□ -0.13
PDLIM5-202ENST00000318007 FRG2CA6NGY1 282 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 ZNF891A8MT65 544 aaPredicted RBP14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 ASNA1O43681 348 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 GMNNO75496 209 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 GCM2O75603 506 aaPredicted RBP14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 PGM3O95394 542 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 HTR1EP28566 365 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 IL12BP29460 328 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 PCGF2P35227 344 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 PIGAP37287 484 aa14.21□□□□□ -0.13
PDLIM5-202ENST00000318007 CCL11P51671 97 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms