RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 C11orf74Q86VG3 221 aa13□□□□□ -0.33
MKS1-201ENST00000313863 COMTD1Q86VU5 262 aa13□□□□□ -0.33
MKS1-201ENST00000313863 AMZ2Q86W34 360 aa13□□□□□ -0.33
MKS1-201ENST00000313863 GID4Q8IVV7 300 aa13□□□□□ -0.33
MKS1-201ENST00000313863 CCDC28AQ8IWP9 274 aa13□□□□□ -0.33
MKS1-201ENST00000313863 GHDCQ8N2G8 530 aa13□□□□□ -0.33
MKS1-201ENST00000313863 ZFP41Q8N8Y5 198 aa13□□□□□ -0.33
MKS1-201ENST00000313863 OR8D4Q8NGM9 314 aa13□□□□□ -0.33
MKS1-201ENST00000313863 OR5K2Q8NHB8 316 aa13□□□□□ -0.33
MKS1-201ENST00000313863 DPH7Q9BTV6 452 aa13□□□□□ -0.33
MKS1-201ENST00000313863 HDHD5Q9BXW7 423 aa13□□□□□ -0.33
MKS1-201ENST00000313863 PIGUQ9H490 435 aa13□□□□□ -0.33
MKS1-201ENST00000313863 LHX9Q9NQ69 397 aa13□□□□□ -0.33
MKS1-201ENST00000313863 NCKAP1Q9Y2A7 1128 aa13□□□□□ -0.33
MKS1-201ENST00000313863 HSPB11Q9Y547 144 aa13□□□□□ -0.33
MKS1-201ENST00000313863 HEATR5BQ9P2D3 2071 aa13□□□□□ -0.33
MKS1-201ENST00000313863 A0A0A6YYD5 115 aa13□□□□□ -0.33
MKS1-201ENST00000313863 OR1F1O43749 312 aa13□□□□□ -0.33
MKS1-201ENST00000313863 ADH1AP07327 375 aa13□□□□□ -0.33
MKS1-201ENST00000313863 ACP5P13686 325 aa13□□□□□ -0.33
MKS1-201ENST00000313863 ARFIP1P53367 373 aa13□□□□□ -0.33
MKS1-201ENST00000313863 PRR5P85299 388 aa13□□□□□ -0.33
MKS1-201ENST00000313863 CCNJQ5T5M9 372 aa13□□□□□ -0.33
MKS1-201ENST00000313863 NDUFAF5Q5TEU4 345 aa13□□□□□ -0.33
MKS1-201ENST00000313863 HBMQ6B0K9 141 aa13□□□□□ -0.33
MKS1-201ENST00000313863 C2orf73Q8N5S3 287 aaPredicted RBP13□□□□□ -0.33
MKS1-201ENST00000313863 LRRC17Q8N6Y2 441 aa13□□□□□ -0.33
MKS1-201ENST00000313863 KREMEN2Q8NCW0 462 aa13□□□□□ -0.33
MKS1-201ENST00000313863 CXorf40AQ8TE69 158 aa13□□□□□ -0.33
MKS1-201ENST00000313863 ACOT11Q8WXI4 607 aaPredicted RBP13□□□□□ -0.33
MKS1-201ENST00000313863 MYLIPQ8WY64 445 aa13□□□□□ -0.33
MKS1-201ENST00000313863 RFT1Q96AA3 541 aa13□□□□□ -0.33
MKS1-201ENST00000313863 SLC28A3Q9HAS3 691 aa13□□□□□ -0.33
MKS1-201ENST00000313863 CUEDC1Q9NWM3 386 aaPredicted RBP13□□□□□ -0.33
MKS1-201ENST00000313863 PTGFRNQ9P2B2 879 aa13□□□□□ -0.33
MKS1-201ENST00000313863 TNFRSF10DQ9UBN6 386 aa13□□□□□ -0.33
MKS1-201ENST00000313863 EXTL2Q9UBQ6 330 aa13□□□□□ -0.33
MKS1-201ENST00000313863 A0A0G2JMP0 313 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 LOC102723532A0A0G2JNH3 316 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 GSAPA4D1B5 854 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 K7ESM1 405 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 SLC9A3R1O14745 358 aaPredicted RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 RFPL3O75679 317 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 EPPINO95925 133 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 C6P13671 934 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 CD53P19397 219 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 F8A1P23610 371 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 RBMS1P29558 406 aaKnown RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 SLC6A1P30531 599 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 SOX18P35713 384 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 CSTF1Q05048 431 aaKnown RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 ZNF155Q12901 538 aaPredicted RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 PGGHGQ32M88 737 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 LILRA6Q6PI73 481 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 ZNF322Q6U7Q0 402 aaPredicted RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 SHFQ7M4L6 423 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 OR5M3Q8NGP4 307 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 SPRYD4Q8WW59 207 aaPredicted RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 FAM46AQ96IP4 442 aaKnown RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 SECISBP2Q96T21 854 aaKnown RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 WACQ9BTA9 647 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 RNF32Q9H0A6 362 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 MED28Q9H204 178 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 C11orf49Q9H6J7 331 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 RANBP3Q9H6Z4 567 aaPredicted RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 CACYBPQ9HB71 228 aaKnown RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 CYSLTR2Q9NS75 346 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 IL20Q9NYY1 176 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 NLGN3Q9NZ94 848 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 ENTPD4Q9Y227 616 aa12.99□□□□□ -0.33
MKS1-201ENST00000313863 TMA7Q9Y2S6 64 aaKnown RBP12.99□□□□□ -0.33
MKS1-201ENST00000313863 H7BY64 318 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 OMPP47874 163 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 PRKAG1P54619 331 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 MADCAM1Q13477 382 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 SLC9A5Q14940 896 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 HSD17B12Q53GQ0 312 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 ESCO2Q56NI9 601 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 UBE3DQ7Z6J8 389 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 ELMOD2Q8IZ81 293 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 TMIEQ8NEW7 156 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 OR4F15Q8NGB8 312 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 OR5H6Q8NGV6 325 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 DIO2Q92813 273 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 MARVELD3Q96A59 401 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 PRAP1Q96NZ9 151 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 GFM1Q96RP9 751 aaKnown RBP12.98□□□□□ -0.33
MKS1-201ENST00000313863 ZBP1Q9H171 429 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 LINC00597Q9H2U6 94 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 MTG2Q9H4K7 406 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 EMC7Q9NPA0 242 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 CNIH4Q9P003 139 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.98□□□□□ -0.33
MKS1-201ENST00000313863 A0A1W2PQ72 361 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 FEZF1A0PJY2 475 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 CD8B2A6NJW9 211 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 C12orf71A8MTZ7 269 aa12.98□□□□□ -0.33
MKS1-201ENST00000313863 GTPBP1O00178 669 aaKnown RBP12.98□□□□□ -0.33
MKS1-201ENST00000313863 MAN2B1O00754 1011 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms