RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 NTSP30990 170 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 PNLIPRP2P54317 469 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 GTF3C1Q12789 2109 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 ZNF155Q12901 538 aaPredicted RBP13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 PTGR1Q14914 329 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 WIPI1Q5MNZ9 446 aaPredicted RBP13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 CEP85LQ5SZL2 805 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 VASNQ6EMK4 673 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 TMEM211Q6ICI0 200 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 POMZP3Q6PJE2 187 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 B3GNT6Q6ZMB0 384 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 PACS2Q86VP3 889 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 RIMKLAQ8IXN7 391 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 EID3Q8N140 333 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 ZNF781Q8N8C0 355 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 NAXEQ8NCW5 288 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 FAM83FQ8NEG4 500 aaPredicted RBP13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 LILRB4Q8NHJ6 448 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 EFHD2Q96C19 240 aaPredicted RBP13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 UGT2B28Q9BY64 529 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 UCK2Q9BZX2 261 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 OR2B2Q9GZK3 357 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 LDAHQ9H6V9 325 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 METTL7AQ9H8H3 244 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 CHST11Q9NPF2 352 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 DDX18Q9NVP1 670 aaKnown RBP13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 TAS2R9Q9NYW1 312 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 Q9UFV3 132 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 ATP6V1HQ9UI12 483 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 FBXL2Q9UKC9 423 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 WIF1Q9Y5W5 379 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 ACTL7BQ9Y614 415 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 ABCA12Q86UK0 2595 aa13.3□□□□□ -0.28
PPP1CA-201ENST00000312989 SCAMP2O15127 329 aaKnown RBP13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 TM9SF1O15321 606 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 BIRC5O15392 142 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 ABCB7O75027 752 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 PEX11AO75192 247 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 REM1O75628 298 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 CHEK2O96017 543 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 SERPINE1P05121 402 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 BMP7P18075 431 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 CHRNB4P30926 498 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 GFRA1P56159 465 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 WNT3P56703 355 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 WDR4P57081 412 aaKnown RBP13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 PSPHP78330 225 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 RPP38P78345 283 aaKnown RBP13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 HSPB3Q12988 150 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 CHI3L2Q15782 390 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 ACSF3Q4G176 576 aaPredicted RBP13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 C1orf185Q5T7R7 199 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 WLSQ5T9L3 541 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 LRIG3Q6UXM1 1119 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 LARP4Q71RC2 724 aaKnown RBP eCLIP13.29□□□□□ -0.287e-8■■□□□ 14
PPP1CA-201ENST00000312989 NUDCD3Q8IVD9 361 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 OR1J4Q8NGS1 313 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 RND1Q92730 232 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 PPCDCQ96CD2 204 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 MTERF3Q96E29 417 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 WDYHV1Q96HA8 205 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 PPP3R2Q96LZ3 170 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 G6PC3Q9BUM1 346 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 C1orf50Q9BV19 199 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 SERHLQ9NQF3 203 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 ACSS1Q9NUB1 689 aaPredicted RBP13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 ACAD8Q9UKU7 415 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 MAPRE3Q9UPY8 281 aa13.29□□□□□ -0.28
PPP1CA-201ENST00000312989 OTOGQ6ZRI0 2925 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 GXYLT2A0PJZ3 443 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 WDR91A4D1P6 747 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 NKX2-2O95096 273 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 TUBBP07437 444 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 LAMP1P11279 417 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 EFNA1P20827 205 aaPredicted RBP13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 MASP1P48740 699 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 C21orf58P58505 322 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 EFR3AQ14156 821 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 MLC1Q15049 377 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 CYP27C1Q4G0S4 372 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 BEND6Q5SZJ8 279 aaPredicted RBP13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 APOOLQ6UXV4 268 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 ACAD11Q709F0 780 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 YRDCQ86U90 279 aaKnown RBP13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 MCEMP1Q8IX19 187 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 LIX1Q8N485 282 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 KRTCAP2Q8N6L1 136 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 FADS6Q8N9I5 356 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 OR7A2PQ8NGA2 310 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 PSMA8Q8TAA3 256 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 CA5BP1Q8WTZ4 195 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 ASIC5Q9NY37 505 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 KLRF1Q9NZS2 232 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 CBLCQ9ULV8 474 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 TACC2O95359 2948 aa13.28□□□□□ -0.28
PPP1CA-201ENST00000312989 DNAJC13O75165 2243 aa13.27□□□□□ -0.28
PPP1CA-201ENST00000312989 C15orf38-AP3S2A0A0A6YYH1 394 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 NKX2-6A6NCS4 301 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 TMEM114B3SHH9 223 aa13.27□□□□□ -0.29
PPP1CA-201ENST00000312989 ZIC3O60481 467 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms