RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ZNF768Q9H5H4 540 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 CXorf21Q9HAI6 301 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 ADAP2Q9NPF8 381 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 PRTFDC1Q9NRG1 225 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 NDRG4Q9ULP0 352 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 A4GNTQ9UNA3 340 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 WASF3Q9UPY6 502 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 POFUT2Q9Y2G5 429 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 TMEM184BQ9Y519 407 aaPredicted RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 HSPE1-MOB4S4R3N1 261 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 U3KQA8 63 aa11.08□□□□□ -0.64
TRIM40-205ENST00000307859 FLNBO75369 2602 aaKnown RBP11.08□□□□□ -0.64
TRIM40-205ENST00000307859 A0A087WXM4 84 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 SMIM31A0A1B0GVY4 71 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 EME2A4GXA9 379 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 TMEM150CB9EJG8 249 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 M0R3H8 397 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 CLDN4O14493 209 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 PCDH17O14917 1159 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 TOX3O15405 576 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 OR10H2O60403 315 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 COQ9O75208 318 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 CCNB2O95067 398 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 AK1P00568 194 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 S1PR1P21453 382 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 ELK4P28324 431 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 PRKAR1BP31321 381 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 ALDH3B2P48448 385 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 ARL4DP49703 201 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 SEPHS1P49903 392 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 CDH15P55291 814 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 TPD52P55327 224 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 HSD17B7P56937 341 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 CD47Q08722 323 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 SLC13A2Q13183 592 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 RAPSNQ13702 412 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 EXOSC7Q15024 291 aaKnown RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 CTU2Q2VPK5 515 aaKnown RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 RBM48Q5RL73 367 aaKnown RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 MLIPQ5VWP3 458 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 TYW3Q6IPR3 259 aaKnown RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 DEF8Q6ZN54 512 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 OR51Q1Q8NH59 317 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 ADAMTS16Q8TE57 1224 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 ALPK1Q96QP1 1244 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 SDF2Q99470 211 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF350Q9GZX5 532 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 QRSL1Q9H0R6 528 aaKnown RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 TRIM45Q9H8W5 580 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 NMNAT1Q9HAN9 279 aaPredicted RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 PAPOLBQ9NRJ5 636 aaKnown RBP11.07□□□□□ -0.64
TRIM40-205ENST00000307859 CUTCQ9NTM9 273 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 RLIMQ9NVW2 624 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 RHCGQ9UBD6 479 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 CHST2Q9Y4C5 530 aa11.07□□□□□ -0.64
TRIM40-205ENST00000307859 ASCC3Q8N3C0 2202 aaKnown RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 TRBV4-1A0A0J9YWV2 114 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 SIGLEC6O43699 453 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 FCMRO60667 390 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 SOX30O94993 753 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 OXSR1O95747 527 aaPredicted RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 H1F0P07305 194 aaKnown RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 CYP4B1P13584 511 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 IL7RP16871 459 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 RPS4Y1P22090 263 aaKnown RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ELAVL4P26378 380 aaKnown RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 EPHA2P29317 976 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 STT3AP46977 705 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 HLCSP50747 726 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 SMIM11AP58511 58 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 IL1RL1Q01638 556 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 NPRL3Q12980 569 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 DUSP8Q13202 625 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 NADK2Q4G0N4 442 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ZNF311Q5JNZ3 666 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 C6orf141Q5SZD1 244 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 STPG1Q5TH74 334 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 AP1ARQ63HQ0 302 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 LAIR2Q6ISS4 152 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 HMGN2P46Q86SG4 172 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 SATL1Q86VE3 508 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 VRK2Q86Y07 508 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 GALNT12Q8IXK2 581 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 TAGAPQ8N103 731 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 PARP8Q8N3A8 854 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 OR9Q2Q8NGE9 314 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 OR6T1Q8NGN1 323 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 OR1L3Q8NH93 324 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 DOK4Q8TEW6 326 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 ZG16BQ96DA0 208 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 LOXL4Q96JB6 756 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 HRASLS5Q96KN8 279 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 PRRC1Q96M27 445 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 NUDT22Q9BRQ3 303 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 LMF2Q9BU23 707 aaKnown RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 SAP130Q9H0E3 1048 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 MTHFD2LQ9H903 347 aaPredicted RBP11.06□□□□□ -0.64
TRIM40-205ENST00000307859 CAPN10Q9HC96 672 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 FSCN3Q9NQT6 498 aa11.06□□□□□ -0.64
TRIM40-205ENST00000307859 NDUFA13Q9P0J0 144 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms