RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 DTNBP1Q96EV8 351 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 RMND5BQ96G75 393 aaPredicted RBP10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLC35A4Q96G79 324 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 JSRP1Q96MG2 331 aaPredicted RBP10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CCDC115Q96NT0 180 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TAAR6Q96RI8 345 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ADOQ96SZ5 270 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 YIPF4Q9BSR8 244 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 OSBPL11Q9BXB4 747 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ACTRT3Q9BYD9 372 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 NSRP1Q9H0G5 558 aaKnown RBP10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SH2D2AQ9NP31 389 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 MRGBPQ9NV56 204 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 B4GALT7Q9UBV7 327 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 BTNL2Q9UIR0 455 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PCDHGB3Q9Y5G1 929 aa10.11□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PRAMEF25A6NGN4 478 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CCDC154A6NI56 674 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 DUXAA6NLW8 204 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 NR5A2O00482 541 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 RFXANKO14593 260 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 NKX2-2O95096 273 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SNX4O95219 450 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ACP2P11117 423 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 MATN1P21941 496 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 RFC3P40938 356 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CLK3P49761 638 aaKnown RBP10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ANXA11P50995 505 aaKnown RBP10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 POU6F2P78424 691 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 RBPJQ06330 500 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GAB1Q13480 694 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 IGFBP7Q16270 282 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 C6orf10Q5SRN2 563 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 DNAJC14Q6Y2X3 702 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ZFP62Q8NB50 900 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ST6GALNAC3Q8NDV1 305 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 OR4N2Q8NGD1 307 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PIK3R3Q92569 461 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 HGDQ93099 445 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GIMAP5Q96F15 307 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 OTUB1Q96FW1 271 aaPredicted RBP10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ITCHQ96J02 903 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 STACQ99469 402 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLC35A5Q9BS91 424 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TTTY12Q9BZ98 90 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 IL1RL2Q9HB29 575 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 DUSP22Q9NRW4 184 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 DEPPQ9NTK1 212 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CCDC167Q9P0B6 97 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SEC14L3Q9UDX4 400 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CNOT11Q9UKZ1 510 aaKnown RBP10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ESPL1Q14674 2120 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CHD6Q8TD26 2715 aa10.1□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GTF3C1Q12789 2109 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 A0A0G2JMM0 328 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 A0A1W2PPB8 328 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 A0A1W2PRS3 328 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GXYLT2A0PJZ3 443 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ANKRD33BA6NCL7 494 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ANKUB1A6NFN9 424 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 FAM166BA8MTA8 275 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 KIR3DP1A8MWS1 328 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 NPIPA5E9PKD4 350 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PYCARD-AS1I3L0S3 204 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CDC40O60508 579 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TSPAN2O60636 221 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SCN2BO60939 215 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 AGR2O95994 175 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CYP4B1P13584 511 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ATP6V1C1P21283 382 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CASP3P42574 277 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 KHKP50053 298 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 PHC1P78364 1004 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SNTA1Q13424 505 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 RCAN2Q14206 197 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 DUSP5Q16690 384 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 AGKQ53H12 422 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ATAD3BQ5T9A4 648 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 METTL21CQ5VZV1 264 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLC30A6Q6NXT4 461 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 TMEM81Q6P7N7 255 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GFRALQ6UXV0 394 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 BNC2Q6ZN30 1099 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 ZNF621Q6ZSS3 439 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 C6orf120Q7Z4R8 191 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GHDCQ8N2G8 530 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 FAM109AQ8N4B1 249 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLC16A11Q8NCK7 471 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 HOXB13Q92826 284 aaPredicted RBP10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 CDS1Q92903 461 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SPDL1Q96EA4 605 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 C16orf58Q96GQ5 468 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 GPR137Q96N19 417 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 OR7D2Q96RA2 312 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 NODALQ96S42 347 aa10.09□□□□□ -0.79
CSPG4P2Y-201ENST00000306853 SLX1AQ9BQ83 275 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms