RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 CHDHQ8NE62 594 aaPredicted RBP13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 OR4D11Q8NGI4 311 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 CNIH3Q8TBE1 160 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 CLIP3Q96DZ5 547 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 NIPSNAP1Q9BPW8 284 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 TECTAO75443 2155 aa13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 MN1Q10571 1320 aaPredicted RBP13.53□□□□□ -0.24
SHCBP1-201ENST00000303383 FITM1A5D6W6 292 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 RECKO95980 971 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 CFHR1Q03591 330 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 MAP4K2Q12851 820 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 TRIM61Q5EBN2 209 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 ARHGAP40Q5TG30 622 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 BROXQ5VW32 411 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 C16orf87Q6PH81 154 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 TSPYL5Q86VY4 417 aaPredicted RBP13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 OR1L3Q8NH93 324 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 SAP25Q8TEE9 199 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 APOBEC4Q8WW27 367 aaKnown RBP13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 PELOQ9BRX2 385 aaKnown RBP13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 KCND3Q9UK17 655 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 HSPE1-MOB4S4R3N1 261 aa13.52□□□□□ -0.24
SHCBP1-201ENST00000303383 FFAR1O14842 300 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 SOX30O94993 753 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 OXSR1O95747 527 aaPredicted RBP13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 FBLP22087 321 aaKnown RBP13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 ELAVL4P26378 380 aaKnown RBP13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 PRKAR1BP31321 381 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 HLCSP50747 726 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 EMP3P54852 163 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 ISL1P61371 349 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 LPAL2Q16609 132 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 TMEM71Q6P5X7 295 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 RBM44Q6ZP01 1051 aaKnown RBP13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 PLEKHM3Q6ZWE6 761 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 PRSS42Q7Z5A4 293 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF619Q8N2I2 560 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 CEP76Q8TAP6 659 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 FAM81AQ8TBF8 368 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 MVB12AQ96EY5 273 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 PRRC1Q96M27 445 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 PNO1Q9NRX1 252 aaKnown RBP13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF443Q9Y2A4 671 aaPredicted RBP13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 OR10H1Q9Y4A9 318 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 CPSF4LA6NMK7 179 aaKnown RBP13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 CER1O95813 267 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 EPHA2P29317 976 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 SSTR4P31391 388 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 TARDBPQ13148 414 aaKnown RBP eCLIP13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 INAVAQ3KP66 663 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 PRAMEF17Q5VTA0 474 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 C1orf189Q5VU69 101 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 GPR141Q7Z602 305 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 NAT6Q93015 286 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 SLC38A4Q969I6 547 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 MGAT4BQ9UQ53 548 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 ERVK-19Q9WJR5 959 aa13.52□□□□□ -0.25
SHCBP1-201ENST00000303383 TMEM221A6NGB7 291 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 H3BN98 237 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 M0R296 226 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF749O43361 778 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 PRAMEF2O60811 474 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 CPNE6O95741 557 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 RPLP0P05388 317 aaKnown RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 TDGF1P13385 188 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 NUP107P57740 925 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 NEDD8Q15843 81 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 TYW3Q6IPR3 259 aaKnown RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 DGAT2L6Q6ZPD8 337 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 PRSS58Q8IYP2 241 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 DRAXINQ8NBI3 349 aaPredicted RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 CNDP2Q96KP4 475 aaKnown RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 WFDC6Q9BQY6 131 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 TMEM165Q9HC07 324 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 ZNF304Q9HCX3 659 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 SATB2Q9UPW6 733 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 TPRKBQ9Y3C4 175 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 OR6B1O95007 311 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 CBX7O95931 251 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 GASTP01350 101 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 DBIP07108 87 aaKnown RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 AGXTP21549 392 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 FMO3P31513 532 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 STT3AP46977 705 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 CDK5R2Q13319 367 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 CTU2Q2VPK5 515 aaKnown RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 ZC3H14Q6PJT7 736 aaKnown RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 NR4A3Q92570 626 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 CTHRC1Q96CG8 243 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 SLC41A2Q96JW4 573 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 GABARAPL3Q9BY60 117 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 FOLH1BQ9HBA9 442 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 NDRG4Q9ULP0 352 aaKnown RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 TMEM184BQ9Y519 407 aaPredicted RBP13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 A8MUA0 341 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 PATE3B3GLJ2 98 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 ADAP00813 363 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 MGAT2Q10469 447 aa13.51□□□□□ -0.25
SHCBP1-201ENST00000303383 BIKQ13323 160 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms