RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ZIC2O95409 532 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 KLF8O95600 359 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 CLEC3BP05452 202 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 STSP08842 583 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 C1GALT1C1LP0DN25 315 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 WDR4P57081 412 aaKnown RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 PEA15Q15121 130 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 STK11Q15831 433 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SMYD5Q6GMV2 418 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 DNAJC22Q8N4W6 341 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 TMEM185AQ8NFB2 350 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 RSC1A1Q92681 617 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 FKBP10Q96AY3 582 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 C11orf49Q9H6J7 331 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF286AQ9HBT8 521 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 KCTD3Q9Y597 815 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 PCDHAC2Q9Y5I4 1007 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 LOC105369274A0A096LPK9 316 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 OR5K4A6NMS3 321 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 DVL2O14641 736 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 YY2O15391 372 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 TGM5O43548 720 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 TFP02787 698 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 UGT2B7P16662 529 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 OR4N4Q8N0Y3 316 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 OR2T35Q8NGX2 323 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 LGALS12Q96DT0 336 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 ELMOD3Q96FG2 381 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 WDR92Q96MX6 357 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 MAP3K3Q99759 626 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 BTBD2Q9BX70 525 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 NXF5Q9H1B4 397 aaKnown RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF160Q9HCG1 818 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SPATA6Q9NWH7 488 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 CD300AQ9UGN4 299 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 MEGF11A6BM72 1044 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 OR5H15A6NDH6 313 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 OR5H14A6NHG9 310 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 OR5H1A6NKK0 313 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SNAP29O95721 258 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 CRYZL1O95825 349 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 PNMTP11086 282 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 TIMP2P16035 220 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SEC61A1P61619 476 aaKnown RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 TDGQ13569 410 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF678Q5SXM1 525 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 HIST2H3PS2Q5TEC6 136 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SHFQ7M4L6 423 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 OR8J3Q8NGG0 315 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 TCEAL7Q9BRU2 100 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 PIGVQ9NUD9 493 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 ACAD8Q9UKU7 415 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 TCRBV7S3A2A0A539 114 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 PLSCR5A0PG75 271 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SNRNP70P08621 437 aaKnown RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 DNAJB1P25685 340 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 EVI2BP34910 448 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 STT3AP46977 705 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 EPHA4P54764 986 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 RPS21P63220 83 aaKnown RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 MZT1Q08AG7 82 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 NANOGP8Q6NSW7 305 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 CERS5Q8N5B7 392 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 CHDHQ8NE62 594 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 IL1F10Q8WWZ1 152 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 CAPNS2Q96L46 248 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 GPR22Q99680 433 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SGIP1Q9BQI5 828 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 NICN1Q9BSH3 213 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 NANOGQ9H9S0 305 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 XPNPEP1Q9NQW7 623 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF355PQ9NSJ1 428 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 H7C1Q1 480 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 RFPL2O75678 378 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 DNAJB5O75953 348 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 SYN1P17600 705 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 ATP4BP51164 291 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 CTXN1P60606 82 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 C1orf61Q13536 156 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 OR52E8Q6IFG1 317 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 BRICD5Q6PL45 260 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 CASD1Q96PB1 797 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 FN3KRPQ9HA64 309 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 PRDM9Q9NQV7 894 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 TLR9Q9NR96 1032 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 SIDT1Q9NXL6 827 aaKnown RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 NKX1-2Q9UD57 310 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 NOCTQ9UK39 431 aaKnown RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 UBR1Q8IWV7 1749 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 RAB3DO95716 219 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 TPT1P13693 172 aaKnown RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 RHCEP18577 417 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 HOXC8P31273 242 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 TIA1P31483 386 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 RAB5CP51148 216 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 PDLIM3Q53GG5 364 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 ABHD17BQ5VST6 288 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 PLBD1Q6P4A8 553 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 HORMAD2Q8N7B1 307 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms