RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MAFKO60675 156 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 SLC22A5O76082 557 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 TBX18O95935 607 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 RAB40ALP0C0E4 278 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 OR8U9P0C7N5 309 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 TCEA1P23193 301 aaKnown RBP7.26□□□□□ -1.25
SF3B3-201ENST00000302516 PTBP1P26599 531 aaKnown RBP eCLIP7.26□□□□□ -1.251e-28■■■□□ 17.1
SF3B3-201ENST00000302516 HNF1BP35680 557 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 SELENOWP63302 87 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 MLLT11Q13015 90 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-201ENST00000302516 ELAVL3Q14576 367 aaKnown RBP7.26□□□□□ -1.25
SF3B3-201ENST00000302516 GPR19Q15760 415 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 ZNF674Q2M3X9 581 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 CATSPEREQ5SY80 951 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 MTFR2Q6P444 385 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 KCNIP4Q6PIL6 250 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 CNTN4Q8IWV2 1026 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 LILRB2Q8N423 598 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 ESX1Q8N693 406 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 CLDN19Q8N6F1 224 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 OR4E2Q8NGC2 313 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 OR8K3Q8NH51 312 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 HMGB4Q8WW32 186 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 RAB40AQ8WXH6 277 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 PTERQ96BW5 349 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 MED17Q9NVC6 651 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 A0A0G2JN53 185 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 ANHXE9PGG2 379 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 NR4A2P43354 598 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 PLCXD2Q0VAA5 305 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 BEND4Q6ZU67 534 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 PPP4R1LQ9P1A2 415 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 A0A1W2PRU2 124 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 TOR1AO14656 332 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 SMAD9O15198 467 aaKnown RBP7.26□□□□□ -1.25
SF3B3-201ENST00000302516 ARPC5O15511 151 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 CLEC3AO75596 197 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 ALDH3B1P43353 468 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 PREPP48147 710 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 PSPHP78330 225 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 CRYZQ08257 329 aaKnown RBP7.26□□□□□ -1.25
SF3B3-201ENST00000302516 COL9A3Q14050 684 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-201ENST00000302516 RNF111Q6ZNA4 994 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 ANKK1Q8NFD2 765 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 OR6Q1Q8NGQ2 317 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 SLC22A8Q8TCC7 542 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 ASB17Q8WXJ9 295 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 KIAA1143Q96AT1 154 aaPredicted RBP7.26□□□□□ -1.25
SF3B3-201ENST00000302516 DEFB118Q96PH6 123 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 HERPUD2Q9BSE4 406 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 SLC19A3Q9BZV2 496 aa7.26□□□□□ -1.25
SF3B3-201ENST00000302516 HMGCLP35914 325 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 POLR2HP52434 150 aaKnown RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 CREB5Q02930 508 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SIX1Q15475 284 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 KIAA1211LQ6NV74 962 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 FAM83HQ6ZRV2 1179 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 FNDC9Q8TBE3 224 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ELMOD3Q96FG2 381 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 PRRC1Q96M27 445 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SLC25A31Q9H0C2 315 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 LDAHQ9H6V9 325 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ATG4BQ9Y4P1 393 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 NUP214P35658 2090 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 TTC3P53804 2025 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 RPL17P18621 184 aaKnown RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 PRKACBP22694 351 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 BDKRB2P30411 391 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ACVR1BP36896 505 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 CAV3P56539 151 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 TAS2R19P59542 299 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 FPGSQ05932 587 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 FGFBP1Q14512 234 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ELOCQ15369 112 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 WDR45BQ5MNZ6 344 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ATAD3CQ5T2N8 411 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ALKBH2Q6NS38 261 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 BRIX1Q8TDN6 353 aaKnown RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 DCUN1D4Q92564 292 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 INSL6Q9Y581 213 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 MEIOCA2RUB1 952 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 WTIPA6NIX2 430 aaPredicted RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 TMEM88BA6NKF7 163 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SHOXO15266 292 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 MAS1P04201 325 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 NUDT7P0C024 238 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 PRKACAP17612 351 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 GABRA5P31644 462 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 CD79BP40259 229 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 LSSP48449 732 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SH3BP2P78314 561 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 PPP1R8Q12972 351 aaKnown RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ARHGAP19Q14CB8 494 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 SLC43A2Q8N370 569 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 TBC1D15Q8TC07 691 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 ZFAND1Q8TCF1 268 aa7.25□□□□□ -1.25
SF3B3-201ENST00000302516 NANOS1Q8WY41 292 aaKnown RBP7.25□□□□□ -1.25
SF3B3-201ENST00000302516 XYLT2Q9H1B5 865 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms