RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CACNG6Q9BXT2 260 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 METTL17Q9H7H0 456 aaPredicted RBP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 DMRT3Q9NQL9 472 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SIRT4Q9Y6E7 314 aaPredicted RBP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 MYO10Q9HD67 2058 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 OR2AG2A6NM03 316 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SOCS5O75159 536 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 UBXN7O94888 489 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 CH25HO95992 272 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 HECTD3Q5T447 861 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 NDUFAF5Q5TEU4 345 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 KIAA1161Q6NSJ0 714 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 C1orf94Q6P1W5 598 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 NLRC3Q7RTR2 1065 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 HS6ST3Q8IZP7 471 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 DCAF4L2Q8NA75 395 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 ZNF527Q8NB42 609 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 YIPF5Q969M3 257 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 NEURL3Q96EH8 262 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 LYSMD1Q96S90 227 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SERHL2Q9H4I8 314 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 MCCC2Q9HCC0 563 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SEC14L3Q9UDX4 400 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SLC9A8Q9Y2E8 581 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 NPTNQ9Y639 398 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 IRGMA1A4Y4 181 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 OR6C75A6NL08 312 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 HMGN4O00479 90 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SSNA1O43805 119 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 EFCAB14O75071 495 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SOX30O94993 753 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 EPPINO95925 133 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 POU3F2P20265 443 aaPredicted RBP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SHC1P29353 583 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 DGCR2P98153 550 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SLBPQ14493 270 aaKnown RBP eCLIP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 NDUFA9Q16795 377 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 ENTPD8Q5MY95 495 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 SLC27A4Q6P1M0 643 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 TFAP2EQ6VUC0 442 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 TPRG1Q6ZUI0 275 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 MRGPREQ86SM8 312 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 FBXO15Q8NCQ5 510 aaPredicted RBP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 BBS1Q8NFJ9 593 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 C12orf66Q96MD2 445 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 C2orf49Q9BVC5 232 aaPredicted RBP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 ABCG4Q9H172 646 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 ISG20L2Q9H9L3 353 aaKnown RBP10.23□□□□□ -0.77
ZNF558-201ENST00000301475 ASB6Q9NWX5 421 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 KIF25Q9UIL4 384 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 POMT2Q9UKY4 750 aa10.23□□□□□ -0.77
ZNF558-201ENST00000301475 NPC1O15118 1278 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 NFATC1O95644 943 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 ANKRD34CP0C6C1 535 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 PRKAR2AP13861 404 aaKnown RBP10.22□□□□□ -0.77
ZNF558-201ENST00000301475 NPR2P20594 1047 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 ACSL1P33121 698 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 MTNR1BP49286 362 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 TSTA3Q13630 321 aaPredicted RBP10.22□□□□□ -0.77
ZNF558-201ENST00000301475 SYPL1Q16563 259 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 SMARCD3Q6STE5 483 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 ZNF783Q6ZMS7 281 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 RTN4RL1Q86UN2 441 aaPredicted RBP10.22□□□□□ -0.77
ZNF558-201ENST00000301475 KLHL36Q8N4N3 616 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 OR6T1Q8NGN1 323 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 OR56A3Q8NH54 315 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 TEX47Q8TBZ9 253 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 ADAMTS14Q8WXS8 1223 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 PTP4A1Q93096 173 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 RADILQ96JH8 1075 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 ART5Q96L15 291 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 TREX2Q9BQ50 279 aaPredicted RBP10.22□□□□□ -0.77
ZNF558-201ENST00000301475 FNDC11Q9BVV2 318 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 BRD7Q9NPI1 651 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 MIEF1Q9NQG6 463 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 RNF186Q9NXI6 227 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 CNIH4Q9P003 139 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 C5AR2Q9P296 337 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
ZNF558-201ENST00000301475 TEX46H3BTG2 121 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 BNIP3LO60238 219 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 SLCO2B1O94956 709 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 MT-ND4P03905 459 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 ACP5P13686 325 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 DRD5P21918 477 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 LCN1P31025 176 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 MMP12P39900 470 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 TPMTP51580 245 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 TSPAN5P62079 268 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 ACSM1Q08AH1 577 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 OPCMLQ14982 345 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 RTP2Q5QGT7 225 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 SHEQ5VZ18 495 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 SFXN4Q6P4A7 337 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 LRFN4Q6PJG9 635 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 WASH2PQ6VEQ5 465 aa10.22□□□□□ -0.77
ZNF558-201ENST00000301475 FGD2Q7Z6J4 655 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms