RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CCDC59Q9P031 241 aaKnown RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 FBXL3Q9UKT7 428 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 HCFC2Q9Y5Z7 792 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 URADA6NGE7 173 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 APODP05090 189 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 HOXA9P31269 272 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 ERVK-21P61565 698 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 GBX1Q14549 363 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 OTPQ5XKR4 325 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 THEM6Q8WUY1 208 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 MCCC1Q96RQ3 725 aaPredicted RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 OR10A4Q9H209 315 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 ATXN7L1Q9ULK2 861 aaPredicted RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 A0A1W2PQU0 124 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 SOCS6O14544 535 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 SOX18P35713 384 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ERVFC1P60507 584 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 TSPAN5P62079 268 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 ACOT4Q8N9L9 421 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 PJA1Q8NG27 643 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 OR52E2Q8NGJ4 325 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 RASD1Q9Y272 281 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 MED31Q9Y3C7 131 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 COLEC10Q9Y6Z7 277 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 IRGMA1A4Y4 181 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ANXA2P2A6NMY6 339 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 HRO43593 1189 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 SLC2A10O95528 541 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ANXA2P07355 339 aaKnown RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 ZDHHC11BP0C7U3 371 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 MMP11P24347 488 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 EIF1AXP47813 144 aaKnown RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 ELAVL3Q14576 367 aaKnown RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 ANKRD54Q6NXT1 300 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 JAZF1Q86VZ6 243 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 VWA5B2Q8N398 1253 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 UCN3Q969E3 161 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 CCDC120Q96HB5 630 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ZNF559Q9BR84 538 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 TBC1D24Q9ULP9 559 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 MGAT4AQ9UM21 535 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 NDRG2Q9UN36 371 aaKnown RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 WDR87Q6ZQQ6 2873 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 POM121CA8CG34 1229 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 C11orf98E9PRG8 122 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 H0YIV9 168 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 PLPP1O14494 284 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 KCNK2O95069 426 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 FUT1P19526 365 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 VSX2P58304 361 aaPredicted RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 SNTB2Q13425 540 aaKnown RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 POU4F3Q15319 338 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 SMAD2Q15796 467 aaKnown RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 GALNTL5Q7Z4T8 443 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 SLC44A3Q8N4M1 653 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 OSTF1Q92882 214 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ANKHQ9HCJ1 492 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 PCDHGA4Q9Y5G9 962 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ANKRD61A6NGH8 418 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 FZD6O60353 706 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 NDUFV2P19404 249 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 BNC1Q01954 994 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ILF3Q12906 894 aaKnown RBP eCLIP12.54□□□□□ -0.4
CASC4-201ENST00000299957 EXOSC7Q15024 291 aaKnown RBP12.54□□□□□ -0.4
CASC4-201ENST00000299957 SEC23BQ15437 767 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 C4orf46Q504U0 113 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 PRRT3Q5FWE3 981 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 FAM27D1Q5T7N8 215 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 LAIR1Q6GTX8 287 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 HTR3DQ70Z44 454 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 SYNPOQ8N3V7 929 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ZFPM2Q8WW38 1151 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 YIPF6Q96EC8 236 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 HSPA12BQ96MM6 686 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 ZSWIM3Q96MP5 696 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 PCBD2Q9H0N5 130 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 SLC6A17Q9H1V8 727 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 DPAGT1Q9H3H5 408 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 CALML5Q9NZT1 146 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 TAAR2Q9P1P5 351 aa12.54□□□□□ -0.4
CASC4-201ENST00000299957 GREB1LQ9C091 1923 aaPredicted RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 EDDM13A0A1B0GTR0 161 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 SH3D21A4FU49 640 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 DUXAA6NLW8 204 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 B4DGG1 531 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 PPP1R3DO95685 299 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 CEBPBP17676 345 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ELAVL4P26378 380 aaKnown RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 STOMP27105 288 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ETV5P41161 510 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 STARP49675 285 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ETV1P50549 477 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 WDR5P61964 334 aaKnown RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 MRPL58Q14197 206 aaKnown RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 EIF4HQ15056 248 aaKnown RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 DHRS4L2Q6PKH6 230 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ESPNLQ6ZVH7 1005 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 OR2T35Q8NGX2 323 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms