RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 AGO1Q9UL18 857 aaKnown RBP10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 DUXAA6NLW8 204 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 TPSB2P20231 275 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 MLLT10P55197 1068 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 TPSAB1Q15661 275 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 SPRED3Q2MJR0 410 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 CHAC2Q8WUX2 184 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 SMIM3Q9BZL3 60 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 PLEKHJ1Q9NW61 149 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 USP36Q9P275 1121 aaKnown RBP10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 C17orf112F2Z3M2 114 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 CELP19835 753 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 ABLIM2Q6H8Q1 611 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 KIAA1324Q6UXG2 1013 aaKnown RBP10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 VASH1Q7L8A9 365 aaPredicted RBP10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 PLD5Q8N7P1 536 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 LFNGQ8NES3 379 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 HSD3B7Q9H2F3 369 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 RTCAO00442 366 aaKnown RBP10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 WNT10BO00744 389 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 PBX3P40426 434 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 SOX2P48431 317 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 FSTL4Q6MZW2 842 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 OR7G3Q8NG95 312 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 OR13J1Q8NGT2 312 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 OR8D2Q9GZM6 311 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 NPAP1Q9NZP6 1156 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 ANKMY1Q9P2S6 941 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 GMEB2Q9UKD1 530 aa10.67□□□□□ -0.7
HDGFL3-201ENST00000299633 FSCN2O14926 492 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 DRD5P21918 477 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 RAP1AP62834 184 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 FOXM1Q08050 763 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 DUSP7Q16829 419 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 OR51T1Q8NGJ9 327 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ADCYAP1R1P41586 468 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 BMXP51813 675 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 M1APQ8TC57 530 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ECM29Q5VYK3 1845 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 NEMP2A6NFY4 417 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 SMIM10L2AP0DMW4 78 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 SMIM10L2BP0DMW5 78 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 GRIK5Q16478 980 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 CAMKVQ8NCB2 501 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 NT5C3BQ969T7 300 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 RADILQ96JH8 1075 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 NIPAL2Q9H841 368 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 KCTD3Q9Y597 815 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 PLXND1Q9Y4D7 1925 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 MSI1O43347 362 aaKnown RBP10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 HLA-FP30511 346 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ARHGAP40Q5TG30 622 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 GPC2Q8N158 579 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ST3GAL3Q11203 375 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ENTHD1Q8IYW4 607 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 GPR21Q99679 349 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 GON7Q9BXV9 100 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 MMP28Q9H239 520 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 GBF1Q92538 1859 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 METTL15A6NJ78 407 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 KCNK5O95279 499 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ALDH2P05091 517 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 AKAIN1P0CW23 69 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 OR2T33Q8NG76 320 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 FRS2Q8WU20 508 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 KREMEN1Q96MU8 473 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 P2RX7Q99572 595 aaKnown RBP10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 SLC35D1Q9NTN3 355 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 PHLPP1O60346 1717 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 H7BYZ3 331 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ZNF836Q6ZNA1 936 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 Q8N9G6 341 aaPredicted RBP10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 OR10Z1Q8NGY1 313 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 TRMT61BQ9BVS5 477 aaKnown RBP10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ADAM29Q9UKF5 820 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 CDC14AQ9UNH5 594 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 FAM170BA6NMN3 283 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 SAP18O00422 153 aaKnown RBP10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 SCGB1A1P11684 91 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 CDK18Q07002 472 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 DUSP6Q16828 381 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 UNQ6126/PRO20091Q6UXV3 157 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 CERS6Q6ZMG9 384 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 OR6T1Q8NGN1 323 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 M0R2Z0 102 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 H2BFMP0C1H6 154 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 CBLP22681 906 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 THBS2P35442 1172 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 KCNJ5P48544 419 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ZNF547Q8IVP9 402 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 OR10K1Q8NGX5 313 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 CNIH3Q8TBE1 160 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 URGCP-MRPS24S4R325 110 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 GPR137BO60478 399 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 COQ9O75208 318 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 MEF2DQ14814 521 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 ESCO2Q56NI9 601 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 SIMC1Q8NDZ2 872 aa10.66□□□□□ -0.7
HDGFL3-201ENST00000299633 GPR152Q8TDT2 470 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms