RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 VEGFBP49765 207 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 B2MP61769 119 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SIGLEC14Q08ET2 396 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 WDR34Q96EX3 536 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 PPP1R16AQ96I34 528 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 ART5Q96L15 291 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 GPA33Q99795 319 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 MND1Q9BWT6 205 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 TMEM245Q9H330 911 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 GALNT9Q9HCQ5 603 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 SIRT3Q9NTG7 399 aaPredicted RBP12.66□□□□□ -0.38
CTDP1-202ENST00000299543 MCUBQ9NWR8 336 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 COMMD3Q9UBI1 195 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 AP1M2Q9Y6Q5 423 aa12.66□□□□□ -0.38
CTDP1-202ENST00000299543 E9PQ18 207 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 PXNP49023 591 aaPredicted RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 TAS2R41P59536 307 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 EIF2B5Q13144 721 aaKnown RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 GNA13Q14344 377 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 GALEQ14376 348 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 ELAVL3Q14576 367 aaKnown RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 TMEM107Q6UX40 140 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 CHMP1BQ7LBR1 199 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 TTC9Q92623 222 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 ZG16BQ96DA0 208 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 QRFPRQ96P65 431 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 SCN2AQ99250 2005 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 EPHX3Q9H6B9 360 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 ING3Q9NXR8 418 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 MN1Q10571 1320 aaPredicted RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 FAM240BA0A1B0GVZ2 78 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 HMGN2P05204 90 aaKnown RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 DDX6P26196 483 aaKnown RBP eCLIP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 ERP29P30040 261 aaKnown RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 SSTR2P30874 369 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 ETV5P41161 510 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 P2RY2P41231 377 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 GIPRP48546 466 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 ETV1P50549 477 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 SCN1BQ07699 218 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 ELOAQ14241 798 aaKnown RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 B3GLCTQ6Y288 498 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 LINC00469Q8N7U9 141 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 TMEM145Q8NBT3 493 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 FBXO15Q8NCQ5 510 aaPredicted RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 SLC6A18Q96N87 628 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 KCNN2Q9H2S1 579 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 RDH8Q9NYR8 311 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 NFKBIL1Q9UBC1 381 aaPredicted RBP12.65□□□□□ -0.38
CTDP1-202ENST00000299543 KCNE3Q9Y6H6 103 aa12.65□□□□□ -0.38
CTDP1-202ENST00000299543 FGBP02675 491 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 NTSP30990 170 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 MAT2AP31153 395 aaKnown RBP12.64□□□□□ -0.39
CTDP1-202ENST00000299543 SDC2P34741 201 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 LAPTM4BQ86VI4 370 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 ASB15Q8WXK1 588 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 SMG7Q92540 1137 aaKnown RBP12.64□□□□□ -0.39
CTDP1-202ENST00000299543 KAT2AQ92830 837 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 PLA2G12AQ9BZM1 189 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 TBC1D17Q9HA65 648 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 NLKQ9UBE8 527 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 ALG5Q9Y673 324 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF106Q9H2Y7 1883 aaKnown RBP12.64□□□□□ -0.39
CTDP1-202ENST00000299543 EDDM13A0A1B0GTR0 161 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 A0A1W2PQL4 384 aaPredicted RBP12.64□□□□□ -0.39
CTDP1-202ENST00000299543 FABP12A6NFH5 140 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 RPL6Q02878 288 aaKnown RBP12.64□□□□□ -0.39
CTDP1-202ENST00000299543 PCDH1Q08174 1060 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 TATDN3Q17R31 274 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 OR4C11Q6IEV9 310 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 DGLUCYQ7Z3D6 616 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 COMMD7Q86VX2 200 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 KLHDC8AQ8IYD2 350 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 LSM14AQ8ND56 463 aaKnown RBP12.64□□□□□ -0.39
CTDP1-202ENST00000299543 C19orf18Q8NEA5 215 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 LHFPL5Q8TAF8 219 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 NELL2Q99435 816 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 DPCDQ9BVM2 203 aaPredicted RBP12.64□□□□□ -0.39
CTDP1-202ENST00000299543 A4GALTQ9NPC4 353 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 LHX9Q9NQ69 397 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 SEC14L4Q9UDX3 406 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 SPATA2Q9UM82 520 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 A4GNTQ9UNA3 340 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 NTNG1Q9Y2I2 539 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 C17orf113A0A1B0GUU1 675 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 A0A1W2PRG6 482 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 VEGFDO43915 354 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 TIMP1P01033 207 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 NR2F6P10588 404 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 CRYBB2P43320 205 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 MAP2K6P52564 334 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 TOR1AIP1Q5JTV8 583 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 C18orf63Q68DL7 685 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 KIAA1161Q6NSJ0 714 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 TMEM81Q6P7N7 255 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 ZNF730Q6ZMV8 503 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 SLC30A8Q8IWU4 369 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 LINC01555Q8NAE3 123 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 OR5K2Q8NHB8 316 aa12.64□□□□□ -0.39
CTDP1-202ENST00000299543 ARSGQ96EG1 525 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms