RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 C6orf120Q7Z4R8 191 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 NRROSQ86YC3 692 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 SH3RF2Q8TEC5 729 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ABHD5Q8WTS1 349 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 FZD8Q9H461 694 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 SDHAF2Q9NX18 166 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 A0A1W2PS29 197 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 DCDC2BA2VCK2 349 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 NAT2P11245 290 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ACPPP15309 386 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 CASP3P42574 277 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 SOX9P48436 509 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 Q8N9G6 341 aaPredicted RBP14.13□□□□□ -0.15
SCN3B-201ENST00000299333 OR5D16Q8NGK9 328 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 GAB3Q8WWW8 586 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 SDSLQ96GA7 329 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ARHGAP39Q9C0H5 1083 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 IFT22Q9H7X7 185 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 FAM69AQ5T7M9 428 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF695Q8IW36 515 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 CPT1CQ8TCG5 803 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 THSD1Q9NS62 852 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 POU2F3Q9UKI9 436 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 GJD2Q9UKL4 321 aa14.13□□□□□ -0.15
SCN3B-201ENST00000299333 LOC285095A0A1B0GVY8 99 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 NPIPA2E9PIF3 369 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 NPIPA3F8WFD2 350 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 CSF1P09603 554 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 OSMP13725 252 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 NNATQ16517 81 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 FCRLBQ6BAA4 426 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 CTU1Q7Z7A3 348 aaKnown RBP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 CLECL1Q8IZS7 167 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 SLC35F5Q8WV83 523 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 HPSE2Q8WWQ2 592 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 KCTD13Q8WZ19 329 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 C12orf57Q99622 126 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 KLHL21Q9UJP4 597 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 HCRTO43612 131 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 SELPP16109 830 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 MS4A13Q5J8X5 152 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 RGMBQ6NW40 437 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 LEG1Q6P5S2 330 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 RASGRP3Q8IV61 690 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 ANKK1Q8NFD2 765 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 ZDHHC12Q96GR4 267 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 FUBP3Q96I24 572 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 SGCZQ96LD1 299 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 PINK1Q9BXM7 581 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 OARD1Q9Y530 152 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 PCDHGA2Q9Y5H1 932 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 PEX10O60683 326 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 AKAIN1P0CW23 69 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 SYN1P17600 705 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 EIF2DP41214 584 aaKnown RBP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 VEGFCP49767 419 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 GPR143P51810 404 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 UGT3A2Q3SY77 523 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 GDF6Q6KF10 455 aaPredicted RBP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 OR5W2Q8NH69 310 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 GAREM1Q9H706 876 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 NOX3Q9HBY0 568 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF541Q9H0D2 1346 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 ANKRD26Q9UPS8 1709 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 A0A087WZY1 265 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 SNNO75324 88 aaPredicted RBP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 CDC123O75794 336 aaPredicted RBP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 ZXDBP98169 803 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 TLE1Q04724 770 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 ARSJQ5FYB0 599 aaPredicted RBP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 USP51Q70EK9 711 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 SGPP2Q8IWX5 399 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 OR4K5Q8NGD3 323 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 C2orf15Q8WU43 125 aaKnown RBP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 MICU1Q9BPX6 476 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 ALG8Q9BVK2 526 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 NMNAT1Q9HAN9 279 aaPredicted RBP14.12□□□□□ -0.15
SCN3B-201ENST00000299333 SLAMF7Q9NQ25 335 aa14.12□□□□□ -0.15
SCN3B-201ENST00000299333 TSPAN11A1L157 253 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 TGOLN2O43493 480 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 MED6O75586 246 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 ELOAQ14241 798 aaKnown RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 GDPGP1Q6ZNW5 385 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 METTL27Q8N6F8 245 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 OR51L1Q8NGJ5 315 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 RHEBL1Q8TAI7 183 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 ADAM18Q9Y3Q7 739 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 DNAJC15Q9Y5T4 150 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 VIRMAQ69YN4 1812 aaKnown RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 A0A1W2PRU2 124 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 TMEM88BA6NKF7 163 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 EMC8O43402 210 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 DCTP40126 519 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 RPS27AP62979 156 aaKnown RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 UBA52P62987 128 aaKnown RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 PLP2Q04941 152 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 MICAQ29983 383 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 TP53I3Q53FA7 332 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 ZDHHC14Q8IZN3 488 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms