RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 SLC6A20Q9NP91 592 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 FSCN3Q9NQT6 498 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 RYDENQ9NUL5 291 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 RPS6KA6Q9UK32 745 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 DLGAP4Q9Y2H0 992 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SAMHD1Q9Y3Z3 626 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 POLR3HQ9Y535 204 aaPredicted RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 PCDHGB3Q9Y5G1 929 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SNX8Q9Y5X2 465 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 COLEC10Q9Y6Z7 277 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 U3KQ87 197 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TOR1AO14656 332 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 MYL12BO14950 172 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SDC3O75056 442 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 IFNA16P05015 189 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 PGRP06401 933 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 CHRM5P08912 532 aaPredicted RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 ICAM2P13598 275 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 MYL12AP19105 171 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TACR1P25103 407 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 HSD17B2P37059 387 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 RPS19P39019 145 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 PPP1CAP62136 330 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 CSTF3Q12996 717 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 SLBPQ14493 270 aaKnown RBP eCLIP6.25□□□□□ -1.41
TMC1-201ENST00000297784 PTGR1Q14914 329 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TAB1Q15750 504 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SSX1Q16384 188 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 CLLU1Q5K131 121 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ERICH5Q6P6B1 374 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 PLET1Q6UQ28 207 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 C17orf82Q86X59 251 aaPredicted RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 ZNF761Q86XN6 746 aaPredicted RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 ADGRG3Q86Y34 549 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 LAX1Q8IWV1 398 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TRIM48Q8IWZ4 208 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 GHDCQ8N2G8 530 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 OR2L3Q8NG85 312 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SMPDL3AQ92484 453 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 MGLLQ99685 303 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 GSDMCQ9BYG8 508 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 KCNH6Q9H252 994 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ELOVL6Q9H5J4 265 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 RBFOX1Q9NWB1 397 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 SIRT5Q9NXA8 310 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ATPIF1Q9UII2 106 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 PHF11Q9UIL8 331 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SNX11Q9Y5W9 270 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 HEBP2Q9Y5Z4 205 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 AP1M2Q9Y6Q5 423 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ASXL3Q9C0F0 2248 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 A0A1B0GVT2 93 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SH3D21A4FU49 640 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 A8MVJ9 347 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ZNF670-ZNF695F2Z2N8 137 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 I3L521 148 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 LAMTOR5O43504 91 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SCG5P05408 212 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 HOXD4P09016 255 aaPredicted RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 AMD1P17707 334 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 MAP2K3P46734 347 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 LSSP48449 732 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 DSTNP60981 165 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SNRPD2P62316 118 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 CSNK1G2P78368 415 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 RHAGQ02094 409 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ST3GAL4Q11206 333 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 LAPTM4AQ15012 233 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 AANATQ16613 207 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TSTQ16762 297 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.25□□□□□ -1.41
TMC1-201ENST00000297784 LCN1P1Q5VSP4 162 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 GARNL3Q5VVW2 1013 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 PAMR1Q6UXH9 720 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 HSDL2Q6YN16 418 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 BMP8AQ7Z5Y6 402 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 LURAP1LQ8IV03 231 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 DTWD2Q8NBA8 298 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 FAM46DQ8NEK8 389 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ZNF680Q8NEM1 530 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 OR8H1Q8NGG4 311 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 ZDHHC1Q8WTX9 485 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 PMEPA1Q969W9 287 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TRMT61AQ96FX7 289 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 ZC3H10Q96K80 434 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 FCRL1Q96LA6 429 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 MARVELD1Q9BSK0 173 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 PRRG3Q9BZD7 231 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 REEP1Q9H902 201 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 EVA1BQ9NVM1 165 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 THUMPD1Q9NXG2 353 aaKnown RBP6.25□□□□□ -1.41
TMC1-201ENST00000297784 ZNF226Q9NYT6 803 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 OR6C2Q9NZP2 312 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 SEC14L4Q9UDX3 406 aa6.25□□□□□ -1.41
TMC1-201ENST00000297784 TUBAL3A6NHL2 446 aa6.24□□□□□ -1.41
TMC1-201ENST00000297784 MYO1GB0I1T2 1018 aa6.24□□□□□ -1.41
TMC1-201ENST00000297784 SLC28A1O00337 649 aa6.24□□□□□ -1.41
TMC1-201ENST00000297784 RGS5O15539 181 aa6.24□□□□□ -1.41
TMC1-201ENST00000297784 RGS14O43566 566 aa6.24□□□□□ -1.41
TMC1-201ENST00000297784 PRAMEF10O60809 474 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms