RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 M0R3H8 397 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 KIAA0355O15063 1070 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 GJB3O75712 270 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 GKN3PP0CG01 181 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 CD38P28907 300 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 RGNQ15493 299 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 AWAT2Q6E213 333 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 XKRXQ6PP77 449 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 ZNF765Q7L2R6 523 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 OR5D16Q8NGK9 328 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 NETO1Q8TDF5 533 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 SAMD8Q96LT4 415 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 SLC39A1Q9NY26 324 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 MRPL15Q9P015 296 aaKnown RBP16.37■□□□□ 0.21
SHANK1-201ENST00000293441 CPNE7Q9UBL6 633 aa16.37■□□□□ 0.21
SHANK1-201ENST00000293441 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-201ENST00000293441 HIDE1A8MVS5 230 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 PHYHO14832 338 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 ADAM12O43184 909 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 EDN1P05305 212 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 GSTM2P28161 218 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 XKR5Q6UX68 686 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 CBARPQ8N350 705 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-201ENST00000293441 TMIEQ8NEW7 156 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 KIR2DS5A0A0G2JLQ3 304 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 A0A0G2JNG1 304 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 KIR2DS3K7RE56 304 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 ADAMTS4O75173 837 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 PTGER1P34995 402 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 UGT2B10P36537 528 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 KIR2DS5Q14953 304 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 KDELC1Q6UW63 502 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 DCDC5Q6ZRR9 648 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 ACBD7Q8N6N7 88 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 HDHD5Q9BXW7 423 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 LAMB4A4D0S4 1761 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 FESP07332 822 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 XCR1P46094 333 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 VWA5B2Q8N398 1253 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 PREBQ9HCU5 417 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 MYEF2Q9P2K5 600 aaKnown RBP16.36■□□□□ 0.21
SHANK1-201ENST00000293441 MLXQ9UH92 298 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 PVRP15151 417 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 CDKN2CP42773 168 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 SIX1Q15475 284 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-201ENST00000293441 CYS1Q717R9 158 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 TMEM173Q86WV6 379 aaPredicted RBP16.36■□□□□ 0.21
SHANK1-201ENST00000293441 SLC45A3Q96JT2 553 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 FEVQ99581 238 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 PRSS21Q9Y6M0 314 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 TRBV11-1A0A0K0K1C0 115 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 APLNRP35414 380 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 SLC7A9P82251 487 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 OR51L1Q8NGJ5 315 aa16.36■□□□□ 0.21
SHANK1-201ENST00000293441 A8MV72 311 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-201ENST00000293441 PNMTP11086 282 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 SLC2A5P22732 501 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 GDF1P27539 372 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 RBM39Q14498 530 aaKnown RBP16.35■□□□□ 0.21
SHANK1-201ENST00000293441 A0A1W2PPW3 197 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 PCP4L1A6NKN8 68 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 GNMTQ14749 295 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 OR7A5Q15622 319 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 RCBTB1Q8NDN9 531 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 FAM46BQ96A09 425 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 TMEM68Q96MH6 324 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 TUBA1CQ9BQE3 449 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 NELFAQ9H3P2 528 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 KCNIP1Q9NZI2 227 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 PISDQ9UG56 409 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 ADAMTS6Q9UKP5 1117 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 DIRAS3O95661 229 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 ERV3-1Q14264 604 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 RBM12BQ8IXT5 1001 aaKnown RBP16.35■□□□□ 0.21
SHANK1-201ENST00000293441 TMEM151AQ8N4L1 468 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 OR52R1Q8NGF1 315 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 GPR150Q8NGU9 434 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 TANKQ92844 425 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 MT-ND2P03891 347 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 TMEM225BP0DP42 221 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 ZNF182P17025 639 aaPredicted RBP16.35■□□□□ 0.21
SHANK1-201ENST00000293441 SOX3P41225 446 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 EIF2B1Q14232 305 aaKnown RBP16.35■□□□□ 0.21
SHANK1-201ENST00000293441 SPHARQ15513 63 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 TMEM201Q5SNT2 666 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 CDRT4Q8N9R6 151 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 SPTSSAQ969W0 71 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 ISOC1Q96CN7 298 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 TRMT2BQ96GJ1 504 aaKnown RBP16.35■□□□□ 0.21
SHANK1-201ENST00000293441 ABCG2Q9UNQ0 655 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 ZNF175Q9Y473 711 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 NUMBLQ9Y6R0 609 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 LSM1O15116 133 aaKnown RBP16.35■□□□□ 0.21
SHANK1-201ENST00000293441 OPN1LWP04000 364 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 LCATP04180 440 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 UBL4AP11441 157 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 RAB11BQ15907 218 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 ACOT4Q8N9L9 421 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 POLE4Q9NR33 117 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms