RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ARMC10Q8N2F6 343 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ADAMTS16Q8TE57 1224 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ATOH1Q92858 354 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 MCCC1Q96RQ3 725 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 TREX2Q9BQ50 279 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 Q9N2J8 555 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MGAT4BQ9UQ53 548 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SESN1Q9Y6P5 492 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ENPP4Q9Y6X5 453 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 NYNRINQ9P2P1 1898 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 SAGE2PA6NJ88 616 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 H3BML4 177 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CTDSP2O14595 271 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 VNN2O95498 520 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 AIFM1O95831 613 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 F10P00742 488 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 PTHP01270 115 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 IGLV3-27P01718 113 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ZNF823P16415 610 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 DRD5P21918 477 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MAGEA8P43361 318 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 BLKP51451 505 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TAP2Q03519 686 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ATXN7L3Q14CW9 347 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 HES5Q5TA89 166 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 DCDC5Q6ZRR9 648 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 STX12Q86Y82 276 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR2T33Q8NG76 320 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR2L5Q8NG80 312 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR56A3Q8NH54 315 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR5M11Q96RB7 305 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 RPP25Q9BUL9 199 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 TP63Q9H3D4 680 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 PLEKHA1Q9HB21 404 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 COQ3Q9NZJ6 369 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 PHF11Q9UIL8 331 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 BTNL2Q9UIR0 455 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 LAMP5Q9UJQ1 280 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TBC1D24Q9ULP9 559 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 PRELID1Q9Y255 219 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 RPH3AQ9Y2J0 694 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 DOCK9Q9BZ29 2069 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MYLKQ15746 1914 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 H7C1C5 153 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 PIP5K1CO60331 668 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TRIM3O75382 744 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 PORP16435 677 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 PCGF2P35227 344 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MTNR1AP48039 350 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 EMP3P54852 163 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 LCN6P62502 163 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SRSF5Q13243 272 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 SNTA1Q13424 505 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 DSG2Q14126 1118 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MRPL58Q14197 206 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 ALG10BQ5I7T1 473 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 FAM109BQ6ICB4 259 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 FBXO46Q6PJ61 603 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 CCBE1Q6UXH8 406 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 TSPYL5Q86VY4 417 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 TIGD4Q8IY51 512 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 UBQLNLQ8IYU4 475 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CPXM2Q8N436 756 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SLC37A3Q8NCC5 494 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR6C4Q8NGE1 309 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TBC1D15Q8TC07 691 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ISL2Q96A47 359 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR7D2Q96RA2 312 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 KCNN2Q9H2S1 579 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 GRHPRQ9UBQ7 328 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ERVK-19Q9WJR5 959 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ABCA7Q8IZY2 2146 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 A0A1W2PPL8 197 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 UNC119BA6NIH7 251 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 AKAP8O43823 692 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 LCMT2O60294 686 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 LATS1O95835 1130 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 RETP07949 1114 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 HNRNPA1P09651 372 aaKnown RBP eCLIP4.51□□□□□ -1.69
UBR1-201ENST00000290650 CR2P20023 1033 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CCKBRP32239 447 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MMP12P39900 470 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MAP3K8P41279 467 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 FADDQ13158 208 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 GAS6Q14393 721 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SHHQ15465 462 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 NSDHLQ15738 373 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 FAM69BQ5VUD6 431 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CPZQ66K79 652 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SLC29A4Q7RTT9 530 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SLC9B2Q86UD5 537 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 Q8N402 240 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR5T3Q8NGG3 340 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CRELD1Q96HD1 420 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 POLDIP3Q9BY77 421 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 AMBRA1Q9C0C7 1298 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 RBM38Q9H0Z9 239 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 MAGIXQ9H6Y5 334 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 GORASP2Q9H8Y8 452 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms