RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 SMN1Q16637 294 aaKnown RBP9.49□□□□□ -0.89
C9orf43-201ENST00000288462 AP1ARQ63HQ0 302 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 PMS2CLQ68D20 193 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 PODNL1Q6PEZ8 512 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF836Q6ZNA1 936 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 KANSL1Q7Z3B3 1105 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 WDR5BQ86VZ2 330 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 CLVS1Q8IUQ0 354 aaPredicted RBP9.49□□□□□ -0.89
C9orf43-201ENST00000288462 DEPDC4Q8N2C3 294 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF619Q8N2I2 560 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 RHOXF1Q8NHV9 184 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 DOK4Q8TEW6 326 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 UBE2FQ969M7 185 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 ISOC1Q96CN7 298 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 PEX11GQ96HA9 241 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 ELF4Q99607 663 aaPredicted RBP9.49□□□□□ -0.89
C9orf43-201ENST00000288462 DOK1Q99704 481 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 UCK2Q9BZX2 261 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 CCNB1IP1Q9NPC3 277 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 RASSF1Q9NS23 344 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 PLCXD1Q9NUJ7 323 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF226Q9NYT6 803 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 SLC13A4Q9UKG4 626 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 MKLN1Q9UL63 735 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 SNX5Q9Y5X3 404 aa9.49□□□□□ -0.89
C9orf43-201ENST00000288462 CENPVL1A0A0U1RR11 272 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF749O43361 778 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 OR10H3O60404 316 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 TPST2O60704 377 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 FAM20BO75063 409 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 NKX2-2O95096 273 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 OSMP13725 252 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 GCGRP47871 477 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 AVPR1BP47901 424 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 GSSP48637 474 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 PPM1FP49593 454 aaPredicted RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 SH3BGRP55822 239 aaPredicted RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 EEF1A1P68104 462 aaKnown RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 GPLD1P80108 840 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 MAT1AQ00266 395 aaKnown RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 CFHR1Q03591 330 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 ZNF155Q12901 538 aaPredicted RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 LSAMPQ13449 338 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 PTGES3Q15185 160 aaKnown RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 EIPR1Q53HC9 387 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 CD300LDQ6UXZ3 194 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 PRSS42Q7Z5A4 293 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 CCDC103Q8IW40 242 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 GALNT12Q8IXK2 581 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 PEX5LQ8IYB4 626 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 GALNT15Q8N3T1 639 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 COX18Q8N8Q8 333 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 MAFAQ8NHW3 353 aaPredicted RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 IPCEF1Q8WWN9 437 aaPredicted RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 PMM1Q92871 262 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 AHCYL2Q96HN2 611 aaKnown RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 LMF2Q9BU23 707 aaKnown RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 SPRTNQ9H040 489 aaPredicted RBP9.48□□□□□ -0.89
C9orf43-201ENST00000288462 ANKRD19PQ9H560 264 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 POLE3Q9NRF9 147 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 PRTFDC1Q9NRG1 225 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 KLHL28Q9NXS3 571 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 ERVK-18Q9QC07 812 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 NDOR1Q9UHB4 597 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 CACNA1EQ15878 2313 aa9.48□□□□□ -0.89
C9orf43-201ENST00000288462 PTGES3LE9PB15 166 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 FRS3O43559 492 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 STX11O75558 287 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 SOX30O94993 753 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 TP53P04637 393 aaPredicted RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 DBIP07108 87 aaKnown RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 GUSBP08236 651 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 EPHA8P29322 1005 aaPredicted RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 PEX19P40855 299 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 ARRB1P49407 418 aaPredicted RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 HSD17B7P56937 341 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 RGS8P57771 180 aaPredicted RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 ZXDAP98168 799 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 ALDH6A1Q02252 535 aaKnown RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 SLC13A2Q13183 592 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 SRSF5Q13243 272 aaKnown RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 ILKQ13418 452 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 LARS2Q15031 903 aaKnown RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 SYT16Q17RD7 645 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 CCNJQ5T5M9 372 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 MED25Q71SY5 747 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 PLXDC1Q8IUK5 500 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 NLGN4XQ8N0W4 816 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 CLIP4Q8N3C7 705 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 OR4K5Q8NGD3 323 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 OR52R1Q8NGF1 315 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 PIK3R3Q92569 461 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 MMABQ96EY8 250 aaPredicted RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 RHNO1Q9BSD3 238 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 LHPPQ9H008 270 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 CACYBPQ9HB71 228 aaKnown RBP9.47□□□□□ -0.89
C9orf43-201ENST00000288462 FOLH1BQ9HBA9 442 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 FKBP14Q9NWM8 211 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 TMEM9Q9P0T7 183 aa9.47□□□□□ -0.89
C9orf43-201ENST00000288462 KLHL3Q9UH77 587 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms