RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 AQP1P29972 269 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 OTX2P32243 289 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 PPICP45877 212 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 CRISP3P54108 245 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 PCBP3P57721 371 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 EBPQ15125 230 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 TGIF1Q15583 401 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 ARHGAP11BQ3KRB8 267 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 ENPP6Q6UWR7 440 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 LRRC74BQ6ZQY2 392 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 NDUFAF7Q7L592 441 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 SLC29A4Q7RTT9 530 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 CHDHQ8NE62 594 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 ADIPOR1Q96A54 375 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 FAM122AQ96E09 287 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 IMMP1LQ96LU5 166 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 PKP2Q99959 881 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 TREX2Q9BQ50 279 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 EFHD1Q9BUP0 239 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 BTBD2Q9BX70 525 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 GPN2Q9H9Y4 310 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 BCL2L10Q9HD36 194 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 ZNF223Q9UK11 482 aaPredicted RBP17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 WASF3Q9UPY6 502 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 V9GYQ6 96 aa17.53■□□□□ 0.4
PDLIM3-202ENST00000284770 C2orf92A0A1B0GVN3 265 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 AK1P00568 194 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 DCAF7P61962 342 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 GPAT3Q53EU6 434 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 CRB2Q5IJ48 1285 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 TBCELQ5QJ74 424 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 PRAMEF8Q5VWM4 474 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 PRAMEF7Q5VXH5 474 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 NPSR1Q6W5P4 371 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 HSDL2Q6YN16 418 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 EID3Q8N140 333 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 AMER2Q8N7J2 671 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 TMEM102Q8N9M5 508 aaPredicted RBP17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 KIAA1143Q96AT1 154 aaPredicted RBP17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 SCNM1Q9BWG6 230 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 Q9N2J8 555 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 CALML5Q9NZT1 146 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 IL17BQ9UHF5 180 aa17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 MRPS18BQ9Y676 258 aaKnown RBP17.52■□□□□ 0.4
PDLIM3-202ENST00000284770 GXYLT2A0PJZ3 443 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 CASQ2O14958 399 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 H6PDO95479 791 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 CHRM4P08173 479 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 DRD5P21918 477 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 TRHRP34981 398 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 RNF4P78317 190 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 POU6F2P78424 691 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 IL10RAQ13651 578 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 EXT1Q16394 746 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 TBC1D25Q3MII6 688 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 LRRC23Q53EV4 343 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 DCST2Q5T1A1 773 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 HLA-DQA1Q5Y7H0 255 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 GALNT10Q86SR1 603 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 PATL1Q86TB9 770 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 ZSCAN1Q8NBB4 408 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 OR8K3Q8NH51 312 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 LRTOMTQ8WZ04 291 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 POP5Q969H6 163 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 VPS50Q96JG6 964 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 LCORQ96JN0 433 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 SDF2Q99470 211 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 SEPHS2Q99611 448 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 WWTR1Q9GZV5 400 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 RUBCNLQ9H714 662 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 NSG1A0A0A6YYJ2 146 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 A0A0G2JPF8 293 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 HNRNPCL2B2RXH8 293 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 HNRNPCL3B7ZW38 293 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 M0QX08 132 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 HNRNPRO43390 633 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 TIPRLO75663 272 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 PRKD3O94806 890 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 HNRNPCL4P0DMR1 293 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 BTBD16Q32M84 506 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 RPS26P11Q5JNZ5 115 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 PLAG1Q6DJT9 500 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 C17orf47Q8NEP4 570 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 OR4N2Q8NGD1 307 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 BBS10Q8TAM1 723 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 GAL3ST4Q96RP7 486 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 UGT2B28Q9BY64 529 aa17.51■□□□□ 0.39
PDLIM3-202ENST00000284770 DCHS1Q96JQ0 3298 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 TRBV11-1A0A0K0K1C0 115 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 FRG2CA6NGY1 282 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 KCNK2O95069 426 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 RAP2AP10114 183 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 SPINK2P20155 84 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 PIGAP37287 484 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 HPCAP84074 193 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 CCNJQ5T5M9 372 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 HMBOX1Q6NT76 420 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 CBLL1Q75N03 491 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 ERMP1Q7Z2K6 904 aa17.5■□□□□ 0.39
PDLIM3-202ENST00000284770 RAB43Q86YS6 212 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms