RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 NANPQ8TBE9 248 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 OR51J1Q9H342 316 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 ST6GALNAC4Q9H4F1 302 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 HLA-HP01893 362 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 SERPINA5P05154 406 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 OR1E2P47887 323 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 STEAP3Q658P3 488 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 PGAP1Q75T13 922 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 FAM109AQ8N4B1 249 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 CHCHD4Q8N4Q1 142 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 DRAXINQ8NBI3 349 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-201ENST00000282516 WDR20Q8TBZ3 569 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 ESAMQ96AP7 390 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 ACTR10Q9NZ32 417 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 ABCA1O95477 2261 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 CLDN7O95471 211 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 OR4D2P58180 307 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 FGFBP1Q14512 234 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 OR5L1Q8NGL2 311 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 OR51A7Q8NH64 312 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 SLCO2A1Q92959 643 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 MRIQ9BWK5 157 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 NSUN3Q9H649 340 aaKnown RBP8.32□□□□□ -1.08
NIPBL-201ENST00000282516 PLAGL1Q9UM63 463 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 SPTA1P02549 2419 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 NFKBIEO00221 500 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 FADS1O60427 444 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 BEST1O76090 585 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 APOA2P02652 100 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 TFPTP0C1Z6 253 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 UBE2NLQ5JXB2 153 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 B3GLCTQ6Y288 498 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 MRPL21Q7Z2W9 205 aaKnown RBP8.32□□□□□ -1.08
NIPBL-201ENST00000282516 ADAMTS19Q8TE59 1207 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 UBL7Q96S82 380 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-201ENST00000282516 NICN1Q9BSH3 213 aa8.32□□□□□ -1.08
NIPBL-201ENST00000282516 UNC13CQ8NB66 2214 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 LDB2O43679 373 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 LCMT2O60294 686 aaKnown RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 BCKDHBP21953 392 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SLC2A5P22732 501 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 P2RX1P51575 399 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 HBG1P69891 147 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 HBG2P69892 147 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SPHARQ15513 63 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 TANGO2Q6ICL3 276 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 RGMBQ6NW40 437 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 UNC5DQ6UXZ4 953 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NAA40Q86UY6 237 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF679Q8IYX0 411 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 CSNK1A1LQ8N752 337 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 DPEP3Q9H4B8 488 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ZDHHC2Q9UIJ5 367 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NAV1Q8NEY1 1877 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ABCC6O95255 1503 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 YJEFN3A6XGL0 299 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ADAM10O14672 748 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 EIF4EP06730 217 aaKnown RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 MPPED2Q15777 294 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 DUSP7Q16829 419 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ZNF585AQ6P3V2 769 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SHFQ7M4L6 423 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SLC35F2Q8IXU6 374 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 OR13C4Q8NGS5 318 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 OR52P1PQ8NH57 321 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 FAM122AQ96E09 287 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 RADILQ96JH8 1075 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 ANKRD66B4E2M5 251 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 AGPAT2O15120 278 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 HNF1BP35680 557 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NR4A2P43354 598 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 RPS24P62847 133 aaKnown RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NPRL3Q12980 569 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 Q6ZVU0 165 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 KLHDC7BQ96G42 594 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 CDKN2AIPNLQ96HQ2 116 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 TMEM74Q96NL1 305 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 PTCHD1Q96NR3 888 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 CPNE7Q9UBL6 633 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NKX1-2Q9UD57 310 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 MYBPHLA2RUH7 354 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 CCDC85CA6NKD9 419 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 CEBPZOSA8MTT3 80 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 INPPL1O15357 1258 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 CNTN5O94779 1100 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 RETP07949 1114 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 NFYAP23511 347 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 RAB8AP61006 207 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 METTL4Q8N3J2 472 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 C2CD4AQ8NCU7 369 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 OR5P2Q8WZ92 322 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 MIB2Q96AX9 1013 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 TEPSINQ96N21 525 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SLC17A6Q9P2U8 582 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 C17orf112F2Z3M2 114 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 HLA-DOBP13765 273 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 GDI1P31150 447 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 DAP3P51398 398 aaKnown RBP8.31□□□□□ -1.08
NIPBL-201ENST00000282516 UBE2KP61086 200 aa8.31□□□□□ -1.08
NIPBL-201ENST00000282516 SEMG2Q02383 582 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms