RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 IL37Q9NZH6 218 aa4.21□□□□□ -1.74
CD44-202ENST00000278385 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.21□□□□□ -1.74
CD44-202ENST00000278385 STOX2Q9P2F5 926 aaPredicted RBP4.21□□□□□ -1.74
CD44-202ENST00000278385 RCOR3Q9P2K3 495 aaPredicted RBP4.21□□□□□ -1.74
CD44-202ENST00000278385 ZNF639Q9UID6 485 aa4.21□□□□□ -1.74
CD44-202ENST00000278385 NOCTQ9UK39 431 aaKnown RBP4.21□□□□□ -1.74
CD44-202ENST00000278385 RUVBL2Q9Y230 463 aaKnown RBP4.21□□□□□ -1.74
CD44-202ENST00000278385 RASD1Q9Y272 281 aa4.21□□□□□ -1.74
CD44-202ENST00000278385 LRP12Q9Y561 859 aa4.21□□□□□ -1.74
CD44-202ENST00000278385 A3GALT2U3KPV4 340 aa4.21□□□□□ -1.74
CD44-202ENST00000278385 PLXNA1Q9UIW2 1896 aa4.21□□□□□ -1.74
CD44-202ENST00000278385 KAT6AQ92794 2004 aa4.21□□□□□ -1.74
CD44-202ENST00000278385 ALPK3Q96L96 1907 aa4.21□□□□□ -1.74
CD44-202ENST00000278385 COL1A2P08123 1366 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 IGLV3-22A0A075B6J6 115 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 PLSCR5A0PG75 271 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 GOLGA8IPA6NC78 632 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 PRYO14603 147 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 BCKDKO14874 412 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 EIF3HO15372 352 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD44-202ENST00000278385 OR1F1O43749 312 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 JAK2O60674 1132 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 PFKFB2O60825 505 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 PROP1O75360 226 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 STX11O75558 287 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 CDC123O75794 336 aaPredicted RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 ZNF189O75820 626 aaPredicted RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 ERLIN2O94905 339 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 AHSA1O95433 338 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 GSRP00390 522 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 IGLV2-14P01704 120 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 IGHV2-70P01814 119 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ANXA4P09525 319 aaPredicted RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 POLR2CP19387 275 aaPredicted RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 CCNOP22674 350 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ACKR3P25106 362 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ARRB2P32121 409 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 OTX1P32242 354 aaPredicted RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 MAGEA9P43362 315 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 KCNJ3P48549 501 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SLC9A3P48764 834 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ZNF84P51523 738 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 NUDT6P53370 316 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 CDH6P55285 790 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SUMO2P61956 95 aaKnown RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 SNRPEP62304 92 aaKnown RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 DEFB103AP81534 67 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 MRPS6P82932 125 aaKnown RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 IRF8Q02556 426 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 FOXM1Q08050 763 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 MGAT3Q09327 533 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 PJVKQ0ZLH3 352 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 STIM1Q13586 685 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 CYP1B1Q16678 543 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 MEP1AQ16819 746 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SGSM1Q2NKQ1 1148 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ITPRIPL2Q3MIP1 535 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 Q4G0T1 1027 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 AARS2Q5JTZ9 985 aaKnown RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 MARCH8Q5T0T0 291 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 GPR157Q5UAW9 335 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ALS2CLQ60I27 953 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 NSUN5P2Q63ZY6 315 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SCYL2Q6P3W7 929 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SYCE2Q6PIF2 218 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SASS6Q6UVJ0 657 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD44-202ENST00000278385 SSX9Q7RTT3 188 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SCD5Q86SK9 330 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 AMIGO1Q86WK6 493 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 TMPRSS12Q86WS5 348 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 STX12Q86Y82 276 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 CHERPQ8IWX8 916 aaKnown RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 BLIDQ8IZY5 108 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 LSMEM2Q8N112 164 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 C12orf76Q8N812 135 aaPredicted RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 GATSQ8NAP1 163 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ICA1LQ8NDH6 482 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ABHD11Q8NFV4 315 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 OR8J2Q8NGG1 315 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 OR1J2Q8NGS2 313 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 RP9Q8TA86 221 aaKnown RBP4.2□□□□□ -1.74
CD44-202ENST00000278385 TBCKQ8TEA7 893 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SLC44A1Q8WWI5 657 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 CACNG8Q8WXS5 425 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ARNTL2Q8WYA1 636 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ELMO1Q92556 727 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 PHYHIPQ92561 330 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 TM4SF19Q96DZ7 209 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 ACCSQ96QU6 501 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 PRR25Q96S07 402 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 SLC22A12Q96S37 553 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 RIT2Q99578 217 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 GFI1Q99684 422 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 TIMP4Q99727 224 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 OMDQ99983 421 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 CENPKQ9BS16 269 aa4.2□□□□□ -1.74
CD44-202ENST00000278385 FNDC11Q9BVV2 318 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms