RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 FAAHO00519 579 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 RGS10O43665 173 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 UGT2B17O75795 530 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 NR4A1P22736 598 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 GABRA4P48169 554 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 BCAP31P51572 246 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ID2Q02363 134 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 PRSS48Q7RTY5 328 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 P2RY8Q86VZ1 359 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 OR9Q2Q8NGE9 314 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 OR4D11Q8NGI4 311 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ANKRD9Q96BM1 317 aaPredicted RBP14.3□□□□□ -0.12
SF3B4-201ENST00000271628 DUSP22Q9NRW4 184 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 KLHL28Q9NXS3 571 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ZNF232Q9UNY5 417 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 MGAT4BQ9UQ53 548 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 RNF215Q9Y6U7 377 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 NINQ8N4C6 2090 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 A0A0A6YYC8 382 aaPredicted RBP14.3□□□□□ -0.12
SF3B4-201ENST00000271628 IGHV5-51A0A0C4DH38 117 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 A0A1B0GVT2 93 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 A0A1W2PRQ8 180 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 I3L1I5 382 aaPredicted RBP14.3□□□□□ -0.12
SF3B4-201ENST00000271628 FOXS1O43638 330 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 SEMA7AO75326 666 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 CTSBP07858 339 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 GNSP15586 552 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 GLB1P16278 677 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ELAVL4P26378 380 aaKnown RBP14.3□□□□□ -0.12
SF3B4-201ENST00000271628 EPHA2P29317 976 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 PRKAR1BP31321 381 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 GGT2P36268 569 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 GPR3P46089 330 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 AVPR1BP47901 424 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ARRB1P49407 418 aaPredicted RBP14.3□□□□□ -0.12
SF3B4-201ENST00000271628 GFERP55789 205 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 DMWDQ09019 674 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ATP1A4Q13733 1029 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 DGCR6Q14129 220 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 MLIPQ5VWP3 458 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 RBM45Q8IUH3 476 aaKnown RBP14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ZNF595Q8IYB9 648 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 AQP11Q8NBQ7 271 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 OR6C4Q8NGE1 309 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 CDS1Q92903 461 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ITFG2Q969R8 447 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 CTHRC1Q96CG8 243 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 STACQ99469 402 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 FNDC11Q9BVV2 318 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 ACOT13Q9NPJ3 140 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 AKIP1Q9NQ31 210 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 A4GNTQ9UNA3 340 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 SATB2Q9UPW6 733 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 PCDHGA6Q9Y5G7 932 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 USP34Q70CQ2 3546 aa14.3□□□□□ -0.12
SF3B4-201ENST00000271628 CLDN4O14493 209 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 ADAP00813 363 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 GASTP01350 101 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 ALOX5P09917 674 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 IFNA8P32881 189 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 IDUAP35475 653 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 SOX18P35713 384 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 GPLD1P80108 840 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 INAVAQ3KP66 663 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 ZNF770Q6IQ21 691 aaPredicted RBP14.29□□□□□ -0.12
SF3B4-201ENST00000271628 PLXDC1Q8IUK5 500 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 LACC1Q8IV20 430 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 PRRC1Q96M27 445 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 ADAP2Q9NPF8 381 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 FBXO8Q9NRD0 319 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 MAT2BQ9NZL9 334 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 WDR45Q9Y484 360 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 TP53BP1Q12888 1972 aaPredicted RBP14.29□□□□□ -0.12
SF3B4-201ENST00000271628 LAMA1P25391 3075 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 FITM1A5D6W6 292 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 M0R3H8 397 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 DUX1O43812 170 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 OR10H2O60403 315 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 CTNSO60931 367 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 FAM20BO75063 409 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 AK1P00568 194 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 CTSKP43235 329 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 PSMD7P51665 324 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 MAP4K2Q12851 820 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 PIN1Q13526 163 aaPredicted RBP14.29□□□□□ -0.12
SF3B4-201ENST00000271628 GRM7Q14831 915 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 DUSP5Q16690 384 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 LYSMD4Q5XG99 296 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 OLIG3Q7RTU3 272 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 PEX5LQ8IYB4 626 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 DEPDC4Q8N2C3 294 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 SLC25A45Q8N413 288 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 MINDY2Q8NBR6 621 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 OR6T1Q8NGN1 323 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 OR52P1PQ8NH57 321 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 PMM1Q92871 262 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 RBM18Q96H35 190 aaKnown RBP14.29□□□□□ -0.12
SF3B4-201ENST00000271628 ELF4Q99607 663 aaPredicted RBP14.29□□□□□ -0.12
SF3B4-201ENST00000271628 MUTYHQ9UIF7 546 aa14.29□□□□□ -0.12
SF3B4-201ENST00000271628 IGHV1OR21-1A0A087WYE8 117 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms