RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 HMGN2P05204 90 aaKnown RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 POU3F3P20264 500 aaPredicted RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 GPR176Q14439 515 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 RRM2BQ7LG56 351 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 VRK2Q86Y07 508 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 ZFPM2Q8WW38 1151 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 TFGQ92734 400 aaPredicted RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 CLIP3Q96DZ5 547 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 PPP1R16AQ96I34 528 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 ZCCHC2Q9C0B9 1178 aaKnown RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 MKRN2Q9H000 416 aaKnown RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 OR52A5Q9H2C5 316 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 RHBGQ9H310 441 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 NOS1APO75052 506 aaPredicted RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 MZT2AQ6P582 158 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 METAP1DQ6UB28 335 aaPredicted RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 FAM20CQ8IXL6 584 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 NUS1Q96E22 293 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 DDX31Q9H8H2 851 aaKnown RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 TAS2R7Q9NYW3 318 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 STMN3Q9NZ72 180 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 SLC23A2Q9UGH3 650 aa25.8■■□□□ 1.72
CBX4-201ENST00000269397 ZFR2Q9UPR6 939 aaKnown RBP25.8■■□□□ 1.72
CBX4-201ENST00000269397 NUMA1Q14980 2115 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 IRGMA1A4Y4 181 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 CACNB4O00305 520 aaPredicted RBP25.79■■□□□ 1.72
CBX4-201ENST00000269397 AKAP8O43823 692 aaKnown RBP25.79■■□□□ 1.72
CBX4-201ENST00000269397 TFPIP10646 304 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 ADAM15Q13444 863 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 TEAD2Q15562 447 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 BCL2L15Q5TBC7 163 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 CREB3L2Q70SY1 520 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 C7orf57Q8NEG2 295 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 OR8H1Q8NGG4 311 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 CD99L2Q8TCZ2 262 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 GNPDA2Q8TDQ7 276 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 TBX5Q99593 518 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 KIAA1549LQ6ZVL6 1849 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 TRAV6A0A075B6T7 132 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 A0A0A6YYJ9 748 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 SOCS6O14544 535 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 TRHRP34981 398 aaPredicted RBP25.79■■□□□ 1.72
CBX4-201ENST00000269397 FCN2Q15485 313 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 EOGTQ5NDL2 527 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 KLHL36Q8N4N3 616 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 POGLUT1Q8NBL1 392 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 BBS4Q96RK4 519 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 ZNF649Q9BS31 505 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 C11orf49Q9H6J7 331 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 MAT2BQ9NZL9 334 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 PTGFRNQ9P2B2 879 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 LIPT1Q9Y234 373 aa25.79■■□□□ 1.72
CBX4-201ENST00000269397 USP34Q70CQ2 3546 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 ZC3H12DA2A288 527 aaKnown RBP25.78■■□□□ 1.72
CBX4-201ENST00000269397 PAPLNO95428 1278 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 KELP23276 732 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 DUSP2Q05923 314 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 NKAIN4Q8IVV8 208 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 CCDC116Q8IYX3 515 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 NRSN1Q8IZ57 195 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 LINC00471Q8N535 108 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 OR2L2Q8NH16 312 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 RGMAQ96B86 450 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 NACC2Q96BF6 587 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 TRMT61BQ9BVS5 477 aaKnown RBP25.78■■□□□ 1.72
CBX4-201ENST00000269397 ABT1Q9ULW3 272 aaKnown RBP25.78■■□□□ 1.72
CBX4-201ENST00000269397 SGK494L7N484 410 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 LZTS3O60299 673 aaPredicted RBP25.78■■□□□ 1.72
CBX4-201ENST00000269397 TBX19O60806 448 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 FGBP02675 491 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 SSR2P43308 183 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 TSPAN31Q12999 210 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 DSG2Q14126 1118 aa25.78■■□□□ 1.72
CBX4-201ENST00000269397 ACSS1Q9NUB1 689 aaPredicted RBP25.78■■□□□ 1.72
CBX4-201ENST00000269397 ZNF311Q5JNZ3 666 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 FAM27D1Q5T7N8 215 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 AADACL4Q5VUY2 407 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 ANKRD54Q6NXT1 300 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 C9orf62Q8N4C0 152 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 OR51G2Q8NGK0 314 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 MAP6Q96JE9 813 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 FCRL4Q96PJ5 515 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 DPEP2Q9H4A9 486 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 HMX1Q9NP08 348 aaPredicted RBP25.77■■□□□ 1.72
CBX4-201ENST00000269397 SLC35C2Q9NQQ7 365 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 SIRT4Q9Y6E7 314 aaPredicted RBP25.77■■□□□ 1.72
CBX4-201ENST00000269397 COL4A3Q01955 1670 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 PGRMC2O15173 223 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 C6P13671 934 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 IFNA8P32881 189 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 CCR8P51685 355 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 ZNF793Q6ZN11 406 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 ZNF767PQ75MW2 155 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 MRGPREQ86SM8 312 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 CCDC28AQ8IWP9 274 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 SIRT6Q8N6T7 355 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 BBS10Q8TAM1 723 aa25.77■■□□□ 1.72
CBX4-201ENST00000269397 DNAJA4Q8WW22 397 aaPredicted RBP25.77■■□□□ 1.72
CBX4-201ENST00000269397 PPIL3Q9H2H8 161 aaKnown RBP25.77■■□□□ 1.72
CBX4-201ENST00000269397 SURF4O15260 269 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms