RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 CNPPD1Q9BV87 410 aa10.77□□□□□ -0.69
SCAF11-201ENST00000266589 GRIP2Q9C0E4 1043 aa10.77□□□□□ -0.69
SCAF11-201ENST00000266589 MTHFD2LQ9H903 347 aaPredicted RBP10.77□□□□□ -0.69
SCAF11-201ENST00000266589 FOLH1BQ9HBA9 442 aa10.77□□□□□ -0.69
SCAF11-201ENST00000266589 ZNF304Q9HCX3 659 aa10.77□□□□□ -0.69
SCAF11-201ENST00000266589 PAPOLBQ9NRJ5 636 aaKnown RBP10.77□□□□□ -0.69
SCAF11-201ENST00000266589 A4GNTQ9UNA3 340 aa10.77□□□□□ -0.69
SCAF11-201ENST00000266589 ZNF443Q9Y2A4 671 aaPredicted RBP10.77□□□□□ -0.69
SCAF11-201ENST00000266589 PCDHGA8Q9Y5G5 932 aa10.77□□□□□ -0.69
SCAF11-201ENST00000266589 TRBV4-1A0A0J9YWV2 114 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 IGHV5-10-1A0A0J9YXX1 117 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 A0A1B0GX78 115 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 GXYLT2A0PJZ3 443 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 STX11O75558 287 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 UGT2B17O75795 530 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 AK1P00568 194 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 CKMT1AP12532 417 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 ELAVL4P26378 380 aaKnown RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 ELK4P28324 431 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 CLK3P49761 638 aaKnown RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 EMDP50402 254 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 POU6F2P78424 691 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 ACY1Q03154 408 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 IL18R1Q13478 541 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 PIN1Q13526 163 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 ZNHIT3Q15649 155 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 NPTX1Q15818 432 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 PROX2Q3B8N5 592 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 MINDY4Q4G0A6 757 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 ARHGAP40Q5TG30 622 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 YOD1Q5VVQ6 348 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 FIGNL1Q6PIW4 674 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 DHRS4L2Q6PKH6 230 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 CNDP2Q96KP4 475 aaKnown RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 CCDC74BQ96LY2 380 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 PTCHD1Q96NR3 888 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 ARHGDIGQ99819 225 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 NIPSNAP1Q9BPW8 284 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 PSD2Q9BQI7 771 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 PELOQ9BRX2 385 aaKnown RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 LMF2Q9BU23 707 aaKnown RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 GABARAPL3Q9BY60 117 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 ERVK-19Q9WJR5 959 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 POFUT2Q9Y2G5 429 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 IFT52Q9Y366 437 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 HCN4Q9Y3Q4 1203 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 CHST2Q9Y4C5 530 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 MMACHCQ9Y4U1 282 aa10.76□□□□□ -0.69
SCAF11-201ENST00000266589 HEMK1Q9Y5R4 338 aaPredicted RBP10.76□□□□□ -0.69
SCAF11-201ENST00000266589 ARRDC5A6NEK1 342 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 FRS3O43559 492 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 PRAMEF2O60811 474 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 NKX2-2O95096 273 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 IL7RP16871 459 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 TNNI3P19429 210 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 EPHA2P29317 976 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 CDH15P55291 814 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 PSG6Q00889 435 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 NPRL3Q12980 569 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 RAPSNQ13702 412 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 KEAP1Q14145 624 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 RNF220Q5VTB9 566 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 ZC3H14Q6PJT7 736 aaKnown RBP10.75□□□□□ -0.69
SCAF11-201ENST00000266589 ZNF836Q6ZNA1 936 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 ZNF619Q8N2I2 560 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 AQP11Q8NBQ7 271 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 RNF31Q96EP0 1072 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 PRRC1Q96M27 445 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 ZNF578Q96N58 590 aaPredicted RBP10.75□□□□□ -0.69
SCAF11-201ENST00000266589 FNDC11Q9BVV2 318 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 SLC7A5P2Q9GIP4 190 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 ZNF556Q9HAH1 456 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 CTPS2Q9NRF8 586 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 FBXO34Q9NWN3 711 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 KLHL28Q9NXS3 571 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 TMCC3Q9ULS5 477 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 DTX4Q9Y2E6 619 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 GPR55Q9Y2T6 319 aaPredicted RBP10.75□□□□□ -0.69
SCAF11-201ENST00000266589 GMPPBQ9Y5P6 360 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 CENPVL1A0A0U1RR11 272 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 AGAP5A6NIR3 686 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 CLDN24A6NM45 220 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 KIAA0513O60268 411 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 POU2F1P14859 743 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 CBLP22681 906 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 AVPR2P30518 371 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 GALNSP34059 522 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 MPLP40238 635 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 RFX3P48380 749 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 SMIM11AP58511 58 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 IL5RAQ01344 420 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 CD47Q08722 323 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 BIKQ13323 160 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 LARS2Q15031 903 aaKnown RBP10.75□□□□□ -0.69
SCAF11-201ENST00000266589 SEC23BQ15437 767 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 CTU2Q2VPK5 515 aaKnown RBP10.75□□□□□ -0.69
SCAF11-201ENST00000266589 DCST1Q5T197 706 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 TCEAL6Q6IPX3 200 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 QSOX2Q6ZRP7 698 aa10.75□□□□□ -0.69
SCAF11-201ENST00000266589 MED25Q71SY5 747 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms