RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 FBXL19-AS1Q494R0 122 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 NPSR1Q6W5P4 371 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 TMEM200AQ86VY9 491 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 EIF1ADQ8N9N8 165 aaKnown RBP8.85□□□□□ -0.99
VPS41-201ENST00000265745 OR7G2Q8NG99 324 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 RNF138Q8WVD3 245 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
VPS41-201ENST00000265745 SLC35A4Q96G79 324 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 ADOQ96SZ5 270 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 SH3GL2Q99962 352 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 EBPLQ9BY08 206 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 SHCBP1LQ9BZQ2 653 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 STMN4Q9H169 189 aaPredicted RBP8.85□□□□□ -0.99
VPS41-201ENST00000265745 SERHLQ9NQF3 203 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 GIMAP4Q9NUV9 329 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 MAPRE3Q9UPY8 281 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 CAMK2AQ9UQM7 478 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 HIVEP1P15822 2718 aa8.85□□□□□ -0.99
VPS41-201ENST00000265745 MTORP42345 2549 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 FAM221AA4D161 298 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 MBD3L4A6NDZ8 208 aaPredicted RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 MBD3L3A6NE82 208 aaPredicted RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 MBD3L5A6NJ08 208 aaPredicted RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 MYO1GB0I1T2 1018 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 H3BQF6 201 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 TSPAN2O60636 221 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 PLIN3O60664 434 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 GLRA3O75311 464 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 ERN1O75460 977 aaKnown RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 PROCP04070 461 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 CTSSP25774 331 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 UQCRC1P31930 480 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 CRHR1P34998 444 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 ASCL1P50553 236 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 PNLIPRP2P54317 469 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 GFRA1P56159 465 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 PSPHP78330 225 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 PSG6Q00889 435 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 ZNF763Q0D2J5 394 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 C2orf80Q0P641 193 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 EFR3AQ14156 821 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 ERCC6LQ2NKX8 1250 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 CCDC153Q494R4 210 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 SPDYAQ5MJ70 313 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 FAM71E1Q6IPT2 247 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 FRMD7Q6ZUT3 714 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 LARP4Q71RC2 724 aaKnown RBP eCLIP8.84□□□□□ -0.99
VPS41-201ENST00000265745 ADGRE4PQ86SQ3 457 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 TDRPQ86YL5 185 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 PLCZ1Q86YW0 608 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 SLC44A2Q8IWA5 706 aaPredicted RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 TRIM42Q8IWZ5 723 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 GSPT2Q8IYD1 628 aaKnown RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 ZZZ3Q8IYH5 903 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 FAM9CQ8IZT9 166 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 INTS1Q8N201 2190 aaKnown RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 LRRN4CLQ8ND94 238 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 OR4N2Q8NGD1 307 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 OR14L1PQ8NHC6 308 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 MBD3L2Q8NHZ7 208 aaPredicted RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 FAM76AQ8TAV0 307 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 NRGNQ92686 78 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 BBS4Q96RK4 519 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 TRIB1Q96RU8 372 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 OR2B2Q9GZK3 357 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 FOLH1BQ9HBA9 442 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 TNFRSF12AQ9NP84 129 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 NPHS2Q9NP85 383 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 OXSMQ9NWU1 459 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 TAS2R10Q9NYW0 307 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 TAS2R9Q9NYW1 312 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 CRIM1Q9NZV1 1036 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 FBXL2Q9UKC9 423 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 GRID1Q9ULK0 1009 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 WBP11Q9Y2W2 641 aaKnown RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 MRPS18CQ9Y3D5 142 aaKnown RBP8.84□□□□□ -0.99
VPS41-201ENST00000265745 CCL27Q9Y4X3 112 aa8.84□□□□□ -0.99
VPS41-201ENST00000265745 A0A087WV62 115 aa8.83□□□□□ -1
VPS41-201ENST00000265745 A0A1W2PNR3 127 aa8.83□□□□□ -1
VPS41-201ENST00000265745 B4DXG7 233 aa8.83□□□□□ -1
VPS41-201ENST00000265745 UPK1AO00322 258 aa8.83□□□□□ -1
VPS41-201ENST00000265745 PLOD2O00469 737 aa8.83□□□□□ -1
VPS41-201ENST00000265745 ZIC3O60481 467 aa8.83□□□□□ -1
VPS41-201ENST00000265745 IL18BPO95998 194 aa8.83□□□□□ -1
VPS41-201ENST00000265745 JUNP05412 331 aaKnown RBP8.83□□□□□ -1
VPS41-201ENST00000265745 CYP4B1P13584 511 aa8.83□□□□□ -1
VPS41-201ENST00000265745 CPA3P15088 417 aa8.83□□□□□ -1
VPS41-201ENST00000265745 SRD5A2P31213 254 aa8.83□□□□□ -1
VPS41-201ENST00000265745 DNAJA1P31689 397 aaKnown RBP8.83□□□□□ -1
VPS41-201ENST00000265745 OPRM1P35372 400 aa8.83□□□□□ -1
VPS41-201ENST00000265745 GCKP35557 465 aa8.83□□□□□ -1
VPS41-201ENST00000265745 KRT20P35900 424 aa8.83□□□□□ -1
VPS41-201ENST00000265745 SLCO1A2P46721 670 aa8.83□□□□□ -1
VPS41-201ENST00000265745 STARP49675 285 aa8.83□□□□□ -1
VPS41-201ENST00000265745 NCBP2P52298 156 aaKnown RBP eCLIP8.83□□□□□ -1
VPS41-201ENST00000265745 AGFG1P52594 562 aaKnown RBP8.83□□□□□ -1
VPS41-201ENST00000265745 GAS1P54826 345 aa8.83□□□□□ -1
VPS41-201ENST00000265745 PRR20EP86478 221 aa8.83□□□□□ -1
VPS41-201ENST00000265745 PRR20CP86479 221 aa8.83□□□□□ -1
VPS41-201ENST00000265745 PRR20DP86480 221 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms