RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 TP53P04637 393 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ALDH4A1P30038 563 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 RAB38P57729 211 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ELOCQ15369 112 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 PUS10Q3MIT2 529 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 TYW3Q6IPR3 259 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 RRM2BQ7LG56 351 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ZNF367Q7RTV3 350 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ARHGAP22Q7Z5H3 698 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ZBTB46Q86UZ6 589 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 C19orf47Q8N9M1 422 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 GNPDA2Q8TDQ7 276 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 LGALS12Q96DT0 336 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC25A19Q9HC21 320 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ANKHQ9HCJ1 492 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ADAP2Q9NPF8 381 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 TMEM131Q92545 1883 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 SGK494L7N484 410 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 AIREO43918 545 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 UBXN7O94888 489 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 PTHP01270 115 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 IFI6P09912 130 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC15A1P46059 708 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 CLK1P49759 484 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 C21orf59P57076 290 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 NCS1P62166 190 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 EIPR1Q53HC9 387 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 MEDAGQ5VYS4 303 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ZCCHC12Q6PEW1 402 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ZNF730Q6ZMV8 503 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 PLEKHM3Q6ZWE6 761 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ADCK1Q86TW2 530 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 CLIP4Q8N3C7 705 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 TCEANCQ8N8B7 351 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 CDRT4Q8N9R6 151 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 TMEM52Q8NDY8 209 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 SIMC1Q8NDZ2 872 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 DIO2Q92813 273 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 SDF2Q99470 211 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 GAS2L1Q99501 681 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 MCHR1Q99705 422 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 PRR14Q9BWN1 585 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 FAM60AQ9NP50 221 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 SEMA4GQ9NTN9 838 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 TVP23BQ9NYZ1 205 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 DNAJC27Q9NZQ0 273 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 DOLKQ9UPQ8 538 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 RPL36Q9Y3U8 105 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 CHST2Q9Y4C5 530 aa12.08□□□□□ -0.48
SPTLC1-201ENST00000262554 A0A087WUU8 490 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 FAM170BA6NMN3 283 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 STX11O75558 287 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 CSF2P04141 144 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 THBS1P07996 1170 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 CD27P26842 260 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 SOX18P35713 384 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 SMSP52788 366 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 MLLT10P55197 1068 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 MAZP56270 477 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 DUSP8Q13202 625 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 GINS1Q14691 196 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 OCLNQ16625 522 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 PRICKLE4Q2TBC4 344 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 DEFB110Q30KQ9 67 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 ARMCX4Q5H9R4 360 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 ZNF836Q6ZNA1 936 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 LINC00299Q6ZSB3 139 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 GKN2Q86XP6 184 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 MCATQ8IVS2 390 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 IQCF1Q8N6M8 205 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 COX18Q8N8Q8 333 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 PIGXQ8TBF5 258 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 DYNC2LI1Q8TCX1 351 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 RPL3LQ92901 407 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 ZHX1-C8orf76Q96EF9 292 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 STACQ99469 402 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 POLDIP3Q9BY77 421 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 PALMDQ9NP74 551 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 DUSP22Q9NRW4 184 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 SATB2Q9UPW6 733 aa12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 MRPS17Q9Y2R5 130 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-201ENST00000262554 TMEM265A0A087WTH1 108 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 AGAP5A6NIR3 686 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 SLC9B1P1A6NJY1 282 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 RDH16O75452 317 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 OR5F1O95221 314 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 NADKO95544 446 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 AK1P00568 194 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 RPLP0P05388 317 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 CD38P28907 300 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TRHRP34981 398 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 GIPRP48546 466 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 PCYT1AP49585 367 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 SKP1P63208 163 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 CDK5Q00535 292 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 COL9A2Q14055 689 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-201ENST00000262554 GAS6Q14393 721 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms