RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 PAPD4Q6PIY7 484 aaKnown RBP13.13□□□□□ -0.31
CDH1-201ENST00000261769 SLITRK4Q8IW52 837 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 TMEM178AQ8NBL3 297 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 OR5B2Q96R09 309 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 CCM2LQ9NUG4 571 aaPredicted RBP13.13□□□□□ -0.31
CDH1-201ENST00000261769 MUTYHQ9UIF7 546 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 PCDHA9Q9Y5H5 950 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 A0A1B0GX78 115 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 DHRS4L1P0CG22 281 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 HSD17B1P14061 328 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 NKAIN2Q5VXU1 208 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 NAGSQ8N159 534 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 OR51G2Q8NGK0 314 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 ARL5BQ96KC2 179 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 CDH20Q9HBT6 801 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 TAS2R10Q9NYW0 307 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 DNAJC27Q9NZQ0 273 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 KLHL21Q9UJP4 597 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 RPH3AQ9Y2J0 694 aaPredicted RBP13.13□□□□□ -0.31
CDH1-201ENST00000261769 SAGE2PA6NJ88 616 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 SSR4P51571 173 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 EPHA5P54756 1037 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 PRPS1P60891 318 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 COL9A2Q14055 689 aaPredicted RBP13.13□□□□□ -0.31
CDH1-201ENST00000261769 DCST2Q5T1A1 773 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 IL20RBQ6UXL0 311 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 ASB18Q6ZVZ8 466 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 RAB11FIP2Q7L804 512 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 ERI1Q8IV48 349 aaKnown RBP13.13□□□□□ -0.31
CDH1-201ENST00000261769 NLGN4YQ8NFZ3 816 aaPredicted RBP13.13□□□□□ -0.31
CDH1-201ENST00000261769 SGCDQ92629 289 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 CIDECQ96AQ7 238 aaPredicted RBP13.13□□□□□ -0.31
CDH1-201ENST00000261769 SLC41A3Q96GZ6 507 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 PGAM5Q96HS1 289 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 GINS4Q9BRT9 223 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 LMF2Q9BU23 707 aaKnown RBP13.13□□□□□ -0.31
CDH1-201ENST00000261769 MARCH7Q9H992 704 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 VDAC3Q9Y277 283 aa13.13□□□□□ -0.31
CDH1-201ENST00000261769 XIRP1Q702N8 1843 aaKnown RBP13.12□□□□□ -0.31
CDH1-201ENST00000261769 C5orf67F2Z3F1 127 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 FLRT2O43155 660 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 RORCP51449 518 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 SLC5A12Q1EHB4 618 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 USP43Q70EL4 1123 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 HAVCR1Q96D42 359 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 PDFQ9HBH1 243 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 DHCR7Q9UBM7 475 aaKnown RBP13.12□□□□□ -0.31
CDH1-201ENST00000261769 LY75O60449 1722 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 TEX13CA0A0J9YWL9 993 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 H0Y8X5 98 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 JRKO75564 520 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 ADAP00813 363 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 PEPDP12955 493 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 CD36P16671 472 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 ETV4P43268 484 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 PSPHP78330 225 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 E2F2Q14209 437 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 CADM4Q8NFZ8 388 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 OR4K5Q8NGD3 323 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 LKAAEAR1Q8TD35 194 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 SPEF1Q9Y4P9 236 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 CEP290O15078 2479 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 KNTC1P50748 2209 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.12□□□□□ -0.31
CDH1-201ENST00000261769 A6NIZ1 184 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 FAM25EA8MYX2 175 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 H3BUI4 141 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 PHYHO14832 338 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 YY2O15391 372 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 FOXA1P55317 472 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 RAP1BP61224 184 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 RAP1AP62834 184 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 PERM1Q5SV97 790 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 FAM180BQ6P0A1 224 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 C6orf15Q6UXA7 325 aaPredicted RBP13.12□□□□□ -0.31
CDH1-201ENST00000261769 SNTG1Q9NSN8 517 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 GABRR3A8MPY1 467 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 H3BML4 177 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 NDUFB2O95178 105 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 CTXN1P60606 82 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 SCN1BQ07699 218 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
CDH1-201ENST00000261769 TESCQ96BS2 214 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 FRMD6Q96NE9 622 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 TOR3AQ9H497 397 aa13.12□□□□□ -0.31
CDH1-201ENST00000261769 ATE1O95260 518 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 AIFM1O95831 613 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 GGT1P19440 569 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 NOVA1P51513 510 aaKnown RBP13.11□□□□□ -0.31
CDH1-201ENST00000261769 LAPTM4AQ15012 233 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 ZER1Q7Z7L7 766 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 L3MBTL4Q8NA19 623 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 PITX2Q99697 317 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 SEC14L4Q9UDX3 406 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 TBC1D29Q9UFV1 150 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 A6NLC8 198 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 H0YJX3 145 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 FESP07332 822 aa13.11□□□□□ -0.31
CDH1-201ENST00000261769 IRF2P14316 349 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms