RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TRBV4-1A0A0J9YWV2 114 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 GXYLT2A0PJZ3 443 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 DSCR3O14972 297 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 FRS3O43559 492 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 IFNA16P05015 189 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 SYPP08247 313 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 ANKRD34CP0C6C1 535 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 GABRA3P34903 492 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 EMDP50402 254 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 PGDP52209 483 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 DAB2P98082 770 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 PIN1Q13526 163 aaPredicted RBP20.81■□□□□ 0.92
SIX3-201ENST00000260653 DSG2Q14126 1118 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 GPR68Q15743 365 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 CHDHQ8NE62 594 aaPredicted RBP20.81■□□□□ 0.92
SIX3-201ENST00000260653 PTCHD1Q96NR3 888 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 ACAD8Q9UKU7 415 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 A4GNTQ9UNA3 340 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 SATB2Q9UPW6 733 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 DTX4Q9Y2E6 619 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 PCDHGA8Q9Y5G5 932 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 A0A1B0GX78 115 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 BCKDKO14874 412 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 SLC16A6O15403 523 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 CKMT1AP12532 417 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 PROX2Q3B8N5 592 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 FGD3Q5JSP0 725 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 FIGNL1Q6PIW4 674 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 ZC3H14Q6PJT7 736 aaKnown RBP20.8■□□□□ 0.92
SIX3-201ENST00000260653 DPYSL5Q9BPU6 564 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 ARPC5LQ9BPX5 153 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 GRIP2Q9C0E4 1043 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 MTHFD2LQ9H903 347 aaPredicted RBP20.8■□□□□ 0.92
SIX3-201ENST00000260653 FOLH1BQ9HBA9 442 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 ZNF304Q9HCX3 659 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 CDC14AQ9UNH5 594 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 FBLP22087 321 aaKnown RBP20.8■□□□□ 0.92
SIX3-201ENST00000260653 ELK4P28324 431 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 RPS6KA3P51812 740 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 TPD52P55327 224 aaPredicted RBP20.8■□□□□ 0.92
SIX3-201ENST00000260653 APOFQ13790 326 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 NPTX1Q15818 432 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 MINDY4Q4G0A6 757 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 THAP5Q7Z6K1 395 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 HOXB13Q92826 284 aaPredicted RBP20.8■□□□□ 0.92
SIX3-201ENST00000260653 CCDC74BQ96LY2 380 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 OR1F2PQ96R84 312 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 NIPSNAP1Q9BPW8 284 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 ERVK-19Q9WJR5 959 aa20.8■□□□□ 0.92
SIX3-201ENST00000260653 HEMK1Q9Y5R4 338 aaPredicted RBP20.8■□□□□ 0.92
SIX3-201ENST00000260653 CLDN24A6NM45 220 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 SYT5O00445 386 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 AVPR2P30518 371 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 MPLP40238 635 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 PSG6Q00889 435 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 CLIP4Q8N3C7 705 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 TSLPQ969D9 159 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 CNDP2Q96KP4 475 aaKnown RBP20.79■□□□□ 0.92
SIX3-201ENST00000260653 DHRS1Q96LJ7 313 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 ING2Q9H160 280 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 CTPS2Q9NRF8 586 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 ZNF443Q9Y2A4 671 aaPredicted RBP20.79■□□□□ 0.92
SIX3-201ENST00000260653 CCNB2O95067 398 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 NKX2-2O95096 273 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 CLPTM1O96005 669 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 CDH2P19022 906 aaPredicted RBP20.79■□□□□ 0.92
SIX3-201ENST00000260653 PRKAR1BP31321 381 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 CLK3P49761 638 aaKnown RBP20.79■□□□□ 0.92
SIX3-201ENST00000260653 EFNA3P52797 238 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 CDH15P55291 814 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 POU6F2P78424 691 aaPredicted RBP20.79■□□□□ 0.92
SIX3-201ENST00000260653 RAPSNQ13702 412 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 SERTAD2Q14140 314 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 VWA2Q5GFL6 755 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 ARHGAP40Q5TG30 622 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 TSPAN14Q8NG11 270 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 MRPS26Q9BYN8 205 aaKnown RBP20.79■□□□□ 0.92
SIX3-201ENST00000260653 ARRDC1-AS1Q9H2J1 176 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 HCN4Q9Y3Q4 1203 aa20.79■□□□□ 0.92
SIX3-201ENST00000260653 STX11O75558 287 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 H1F0P07305 194 aaKnown RBP20.78■□□□□ 0.92
SIX3-201ENST00000260653 ANXA8P13928 327 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 ELAVL4P26378 380 aaKnown RBP20.78■□□□□ 0.92
SIX3-201ENST00000260653 SEC23BQ15437 767 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 ZNF691Q5VV52 312 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 DHRS4L2Q6PKH6 230 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 PEX5LQ8IYB4 626 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 VSTM2LQ96N03 204 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 OR6C1Q96RD1 312 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 ARHGDIGQ99819 225 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 PRR14Q9BWN1 585 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 SLC13A4Q9UKG4 626 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 NPIPA5A0A0B4J1W7 369 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 NPIPA7E9PJI5 369 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 UGT2B17O75795 530 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 NPIPA8P0DM63 369 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 POU2F1P14859 743 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 NPRL3Q12980 569 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 MAPK14Q16539 360 aa20.78■□□□□ 0.92
SIX3-201ENST00000260653 ZNF619Q8N2I2 560 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms