RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 SPDYAQ5MJ70 313 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 OR5M10Q6IEU7 315 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 ENPP6Q6UWR7 440 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 PLXDC2Q6UX71 529 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 FRMD7Q6ZUT3 714 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 IFNEQ86WN2 208 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 LRRN4CLQ8ND94 238 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 EFHD2Q96C19 240 aaPredicted RBP15.32■□□□□ 0.04
CGREF1-201ENST00000260595 BBS4Q96RK4 519 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 CXXC4Q9H2H0 198 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 CLCF1Q9UBD9 225 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 CCL27Q9Y4X3 112 aa15.32■□□□□ 0.04
CGREF1-201ENST00000260595 H0Y3Z8 333 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 PLOD2O00469 737 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 PLIN3O60664 434 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 PSMG1O95456 288 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 JUNP05412 331 aaKnown RBP15.31■□□□□ 0.04
CGREF1-201ENST00000260595 TMIGD3P0DMS9 266 aaPredicted RBP15.31■□□□□ 0.04
CGREF1-201ENST00000260595 GRK2P25098 689 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 TACR1P25103 407 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 IL12BP29460 328 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 KRT20P35900 424 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 MC3RP41968 323 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 CLDN18P56856 261 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 DNAJB13P59910 316 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 NAA20P61599 178 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 KIAA0040Q15053 153 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 CDC20BQ86Y33 519 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 FAM76AQ8TAV0 307 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 WNT2BQ93097 391 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 FOXC2Q99958 501 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 C12orf65Q9H3J6 166 aaKnown RBP15.31■□□□□ 0.04
CGREF1-201ENST00000260595 GLIPR2Q9H4G4 154 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 MYNNQ9NPC7 610 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 CCM2LQ9NUG4 571 aaPredicted RBP15.31■□□□□ 0.04
CGREF1-201ENST00000260595 ST6GALNAC2Q9UJ37 374 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 GRID1Q9ULK0 1009 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 C19orf53Q9UNZ5 99 aaPredicted RBP15.31■□□□□ 0.04
CGREF1-201ENST00000260595 WBP11Q9Y2W2 641 aaKnown RBP15.31■□□□□ 0.04
CGREF1-201ENST00000260595 POLR3HQ9Y535 204 aaPredicted RBP15.31■□□□□ 0.04
CGREF1-201ENST00000260595 MED12Q93074 2177 aa15.31■□□□□ 0.04
CGREF1-201ENST00000260595 TUBAL3A6NHL2 446 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 CLCA1A8K7I4 914 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 EEF1E1-BLOC1S5C9J1V9 151 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 H3BQF6 201 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 UPK1AO00322 258 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 EEF1E1O43324 174 aaKnown RBP15.3■□□□□ 0.04
CGREF1-201ENST00000260595 FADS1O60427 444 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 COQ9O75208 318 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 RSL1D1O76021 490 aaKnown RBP15.3■□□□□ 0.04
CGREF1-201ENST00000260595 SLITRK5O94991 958 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 EPXP11678 715 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 ZNF708P17019 499 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 CHMP24386 653 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 CRHR1P34998 444 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 NCBP2P52298 156 aaKnown RBP eCLIP15.3■□□□□ 0.049e-7■■■■□ 23.4
CGREF1-201ENST00000260595 DGKQP52824 942 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 B3GALT5-AS1P59052 145 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 SORDQ00796 357 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 CCDC153Q494R4 210 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 NOXRED1Q6NXP6 359 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 AAGABQ6PD74 315 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 TMEM107Q6UX40 140 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 KIF18BQ86Y91 864 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 TDRPQ86YL5 185 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 OR2L13Q8N349 312 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 FADS6Q8N9I5 356 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 EIF1ADQ8N9N8 165 aaKnown RBP15.3■□□□□ 0.04
CGREF1-201ENST00000260595 CDC26Q8NHZ8 85 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 LINC01560Q8TB33 94 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 ZFP3Q96NJ6 502 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 TM9SF2Q99805 663 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 SFXN3Q9BWM7 321 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 RTN4RQ9BZR6 473 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 OXSMQ9NWU1 459 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 SENP1Q9P0U3 644 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 OR10H1Q9Y4A9 318 aa15.3■□□□□ 0.04
CGREF1-201ENST00000260595 NPIPB8E9PQR5 432 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 HCRTR2O43614 444 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 DPP4P27487 766 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 EVI2BP34910 448 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 CCT5P48643 541 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 ZNF155Q12901 538 aaPredicted RBP15.29■□□□□ 0.04
CGREF1-201ENST00000260595 GAB1Q13480 694 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 IMPG1Q17R60 797 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 CYP27C1Q4G0S4 372 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 INTS12Q96CB8 462 aaKnown RBP15.29■□□□□ 0.04
CGREF1-201ENST00000260595 ELP4Q96EB1 424 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 EGLN2Q96KS0 407 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 SFXN2Q96NB2 322 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 AMDHD1Q96NU7 426 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 MIEF1Q9NQG6 463 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 RRAGDQ9NQL2 400 aaPredicted RBP15.29■□□□□ 0.04
CGREF1-201ENST00000260595 FLRT3Q9NZU0 649 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 DKKL1Q9UK85 242 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 RPH3AQ9Y2J0 694 aaPredicted RBP15.29■□□□□ 0.04
CGREF1-201ENST00000260595 MED13LQ71F56 2210 aa15.29■□□□□ 0.04
CGREF1-201ENST00000260595 TGM6O95932 706 aa15.28■□□□□ 0.04
CGREF1-201ENST00000260595 UROSP10746 265 aa15.28■□□□□ 0.04
CGREF1-201ENST00000260595 CPA3P15088 417 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms