RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ELP4Q96EB1 424 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 EQTNQ9NQ60 294 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 THAP10Q9P2Z0 257 aaPredicted RBP14.29□□□□□ -0.12
DDX56-201ENST00000258772 KCNK6Q9Y257 313 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 TRDV1A0A1B0GX56 115 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 FAM172BPA6NC97 362 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 CCDC182A6NF36 153 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 CENPXA8MT69 81 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 A8MV72 311 aaPredicted RBP14.29□□□□□ -0.12
DDX56-201ENST00000258772 PRICKLE3O43900 615 aaPredicted RBP14.29□□□□□ -0.12
DDX56-201ENST00000258772 LALBAP00709 142 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 F3P13726 295 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 CERS1P27544 350 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 MPIP34949 423 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 MC3RP41968 323 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 CDH11P55287 796 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 CAV3P56539 151 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 KRT33BQ14525 404 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 TBRG1Q3YBR2 411 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 AGBL4Q5VU57 503 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 RDH10Q8IZV5 341 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 GJD3Q8N144 294 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 POGLUT1Q8NBL1 392 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 PRRG3Q9BZD7 231 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 POLMQ9NP87 494 aaPredicted RBP14.29□□□□□ -0.12
DDX56-201ENST00000258772 LIPT1Q9Y234 373 aa14.29□□□□□ -0.12
DDX56-201ENST00000258772 PLA2G10O15496 165 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 CH25HO95992 272 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 PAK4O96013 591 aaPredicted RBP14.28□□□□□ -0.12
DDX56-201ENST00000258772 CCNYL3P0C7X3 344 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 TRAPPC2P0DI81 140 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 TRAPPC2BP0DI82 140 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 AHRP35869 848 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 SLC1A3P43003 542 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 RAB8AP61006 207 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 IRF4Q15306 451 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 PPP2R2DQ66LE6 453 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 SLC30A6Q6NXT4 461 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 NKAIN4Q8IVV8 208 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 FBXL6Q8N531 539 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 OR4F15Q8NGB8 312 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 OR52E1Q8NGJ3 308 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 OR9A2Q8NGT5 310 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 PIGXQ8TBF5 258 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 ASB16Q96NS5 453 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 RAB11FIP5Q9BXF6 653 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 ANKRD19PQ9H560 264 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 PLEKHM1Q9Y4G2 1056 aa14.28□□□□□ -0.12
DDX56-201ENST00000258772 OR52A4PA6NMU1 304 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 B4DXG7 233 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 PROM1O43490 865 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 GNSP15586 552 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 SSTR4P31391 388 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 IFNA8P32881 189 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 SOX18P35713 384 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 AVPR1BP47901 424 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 ARFIP1P53367 373 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 HOXC5Q00444 222 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 AGERQ15109 404 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.27□□□□□ -0.12
DDX56-201ENST00000258772 AADACL4Q5VUY2 407 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 VWA5B2Q8N398 1253 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 TMEM145Q8NBT3 493 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 ATP6V1C2Q8NEY4 427 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 OR4Q3Q8NH05 313 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 RFKQ969G6 155 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 DMRTB1Q96MA1 342 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 ZNF681Q96N22 645 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 C11orf49Q9H6J7 331 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 SYNPO2LQ9H987 977 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 IL20Q9NYY1 176 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 CALML5Q9NZT1 146 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 COMMD3Q9UBI1 195 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 CLCA2Q9UQC9 943 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 CHD7Q9P2D1 2997 aa14.27□□□□□ -0.12
DDX56-201ENST00000258772 CASKO14936 926 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 SURF4O15260 269 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 STAT5AP42229 794 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 MADCAM1Q13477 382 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 FGL2Q14314 439 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 CEBPEQ15744 281 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 SRFBP1Q8NEF9 429 aaKnown RBP14.27□□□□□ -0.13
DDX56-201ENST00000258772 OR2L3Q8NG85 312 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 ACOT11Q8WXI4 607 aaPredicted RBP14.27□□□□□ -0.13
DDX56-201ENST00000258772 OSTF1Q92882 214 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 TIMM29Q9BSF4 260 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 SARGQ9BW04 601 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 PHPT1Q9NRX4 125 aaPredicted RBP14.27□□□□□ -0.13
DDX56-201ENST00000258772 GIMAP4Q9NUV9 329 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 APOBEC3BQ9UH17 382 aaKnown RBP14.27□□□□□ -0.13
DDX56-201ENST00000258772 NTNG1Q9Y2I2 539 aa14.27□□□□□ -0.13
DDX56-201ENST00000258772 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 RFXAPO00287 272 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 FCMRO60667 390 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 ZIC2O95409 532 aaPredicted RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 CSF2P04141 144 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 POU2F2P09086 479 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 APEX1P27695 318 aaKnown RBP14.26□□□□□ -0.13
DDX56-201ENST00000258772 KIR2DL3P43628 341 aa14.26□□□□□ -0.13
DDX56-201ENST00000258772 PPP3R1P63098 170 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms