RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 RPS21P63220 83 aaKnown RBP20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 MXD1Q05195 221 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 TGM3Q08188 693 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 OR2G6Q5TZ20 316 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 C22orf42Q6IC83 251 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 OR6F1Q8NGZ6 308 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 SLC9A6Q92581 669 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 POLMQ9NP87 494 aaPredicted RBP20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 EQTNQ9NQ60 294 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 LYARQ9NX58 379 aaKnown RBP20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 GRIP1Q9Y3R0 1128 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 GPSM3Q9Y4H4 160 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 CPSF4LA6NMK7 179 aaKnown RBP20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 FRS3O43559 492 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 OMPP47874 163 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 MTNR1AP48039 350 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 STXBP1P61764 594 aaKnown RBP20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 ST3GAL3Q11203 375 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 SGCGQ13326 291 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 ZNF544Q6NX49 715 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 ZNF730Q6ZMV8 503 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 ANKK1Q8NFD2 765 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 ARMC5Q96C12 935 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 ZG16BQ96DA0 208 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 GIMAP5Q96F15 307 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 MED18Q9BUE0 208 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 PRRG3Q9BZD7 231 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 MCOLN1Q9GZU1 580 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 PLEKHB1Q9UF11 243 aaPredicted RBP20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 GPR52Q9Y2T5 361 aa20.28■□□□□ 0.84
SH2D3A-201ENST00000245908 KIAA0100Q14667 2235 aaKnown RBP20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 PRKAR1BP31321 381 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 IGFALSP35858 605 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 HNRNPA0Q13151 305 aaKnown RBP20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 BAK1Q16611 211 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 NRARPQ7Z6K4 114 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 TMEM203Q969S6 136 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 KCTD7Q96MP8 289 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 MIXL1Q9H2W2 232 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 ANKRA2Q9H9E1 313 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 CNIH4Q9P003 139 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 MOSPD1Q9UJG1 213 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 ZNF780BQ9Y6R6 833 aa20.27■□□□□ 0.84
SH2D3A-201ENST00000245908 APOL3O95236 402 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 APODP05090 189 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 ASGR2P07307 311 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 CLEC2LP0C7M8 214 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 IL7P13232 177 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 PRKCAP17252 672 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 SLC9A3P48764 834 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 OR2B6P58173 313 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 RPS25P62851 125 aaKnown RBP20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 MAP4K2Q12851 820 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 GLYR1Q49A26 553 aaPredicted RBP20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 QSOX2Q6ZRP7 698 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 NRROSQ86YC3 692 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 UBQLNLQ8IYU4 475 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 SIMC1Q8NDZ2 872 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 PIGXQ8TBF5 258 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 MED30Q96HR3 178 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 FAM46AQ96IP4 442 aaKnown RBP20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 ACTRT3Q9BYD9 372 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 KIR3DX1Q9H7L2 352 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 PRKAG2Q9UGJ0 569 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 SNX7Q9UNH6 387 aa20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 TMA7Q9Y2S6 64 aaKnown RBP20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 YARS2Q9Y2Z4 477 aaKnown RBP20.27■□□□□ 0.83
SH2D3A-201ENST00000245908 PRR23AA6NEV1 266 aa20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 TRHRP34981 398 aaPredicted RBP20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 RFX2P48378 723 aa20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 GPR50Q13585 617 aa20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 ATAD3CQ5T2N8 411 aa20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 C16orf62Q7Z3J2 963 aa20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 UFD1Q92890 307 aa20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 ABCB9Q9NP78 766 aa20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 ATG2AQ2TAZ0 1938 aa20.26■□□□□ 0.83
SH2D3A-201ENST00000245908 ZIC2O95409 532 aaPredicted RBP20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 CCNYL3P0C7X3 344 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 LIMS3P0CW19 117 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 LIMS4P0CW20 117 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 IFNA8P32881 189 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 GPM6BQ13491 265 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 CDK10Q15131 360 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 LTB4RQ15722 352 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 ARMC4Q5T2S8 1044 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 HSDL2Q6YN16 418 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 GATAD2BQ8WXI9 593 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 KAT2AQ92830 837 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 SLC17A9Q9BYT1 436 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 KLHL28Q9NXS3 571 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 A0A1W2PQU0 124 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 SLC30A4O14863 429 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 NTN1O95631 604 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 FPR3P25089 353 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 AZGP1P25311 298 aaKnown RBP20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 ERVK-21P61565 698 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 MLLT1Q03111 559 aaPredicted RBP20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 DECR1Q16698 335 aa20.25■□□□□ 0.83
SH2D3A-201ENST00000245908 ZNF776Q68DI1 518 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms