RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 MAN2C1Q9NTJ4 1040 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 CALML5Q9NZT1 146 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 NTMQ9P121 344 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 CPNE7Q9UBL6 633 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 RPL36Q9Y3U8 105 aaKnown RBP11.9□□□□□ -0.5
SNAI1-201ENST00000244050 EML5Q05BV3 1969 aa11.9□□□□□ -0.5
SNAI1-201ENST00000244050 NINQ8N4C6 2090 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 EPG5Q9HCE0 2579 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 GSAPA4D1B5 854 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 TNFSF14O43557 240 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 WNT1P04628 370 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 ADRA2AP08913 450 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 C8orf89P0DMQ9 161 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 SMIM10L1P0DMW3 83 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 POLR2CP19387 275 aaPredicted RBP11.89□□□□□ -0.51
SNAI1-201ENST00000244050 GRK5P34947 590 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 TGFBR1P36897 503 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 CXCL12P48061 93 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 BTN3A2P78410 334 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 RHAGQ02094 409 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 RGS1Q08116 209 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 OXA1LQ15070 435 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 ZNF404Q494X3 552 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 ENTPD8Q5MY95 495 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 TUBA3EQ6PEY2 450 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 TMEM107Q6UX40 140 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 ZER1Q7Z7L7 766 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 ASPGQ86U10 573 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 SAMD14Q8IZD0 417 aaPredicted RBP11.89□□□□□ -0.51
SNAI1-201ENST00000244050 FAM26EQ8N5C1 309 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 AMER2Q8N7J2 671 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 MORN4Q8NDC4 146 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 NUP43Q8NFH3 380 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 MCFD2Q8NI22 146 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 FLVCR1-AS1Q8TAF5 88 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 SLC37A2Q8TED4 501 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 ZFPM2Q8WW38 1151 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 KLHL6Q8WZ60 621 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 TM4SF19Q96DZ7 209 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 C16orf58Q96GQ5 468 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 SMIM10Q96HG1 83 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 C10orf90Q96M02 699 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 HSPA12BQ96MM6 686 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 OR7D2Q96RA2 312 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 IL4I1Q96RQ9 567 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 YIPF4Q9BSR8 244 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 LRRC61Q9BV99 259 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 RACGAP1Q9H0H5 632 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 DSN1Q9H410 356 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 ZBTB20Q9HC78 741 aaPredicted RBP11.89□□□□□ -0.51
SNAI1-201ENST00000244050 PRDM9Q9NQV7 894 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 CCDC59Q9P031 241 aaKnown RBP11.89□□□□□ -0.51
SNAI1-201ENST00000244050 MKLN1Q9UL63 735 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 KLHL20Q9Y2M5 609 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 KCNE3Q9Y6H6 103 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 ZNF780BQ9Y6R6 833 aa11.89□□□□□ -0.51
SNAI1-201ENST00000244050 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 A0A1W2PS29 197 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 OR6C74A6NCV1 312 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 H3BN98 237 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 SOX14O95416 240 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 IGFBP1P08833 259 aaPredicted RBP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 NR2F6P10588 404 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 ALPPL2P10696 532 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 GSTM3P21266 225 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 MMP11P24347 488 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 CD40LGP29965 261 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 CSTF2P33240 577 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 MC3RP41968 323 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 RACK1P63244 317 aaKnown RBP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 TIMM50Q3ZCQ8 353 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 GPAT3Q53EU6 434 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 MFSD4BQ5TF39 518 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 NIPAL1Q6NVV3 410 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 FBXO42Q6P3S6 717 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 SLC36A4Q6YBV0 504 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 OR4K5Q8NGD3 323 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 OR9A2Q8NGT5 310 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 ZDHHC1Q8WTX9 485 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 GIMAP5Q96F15 307 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 OR5M11Q96RB7 305 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 MGLLQ99685 303 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 ARHGDIGQ99819 225 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 TAPBPLQ9BX59 468 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 POLDIP3Q9BY77 421 aaKnown RBP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 ACTRT3Q9BYD9 372 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 SLC38A1Q9H2H9 487 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 GIN1Q9NXP7 522 aa11.88□□□□□ -0.51
SNAI1-201ENST00000244050 MDC1Q14676 2089 aaKnown RBP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 TP53BP1Q12888 1972 aaPredicted RBP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 TPRP12270 2363 aaKnown RBP11.88□□□□□ -0.51
SNAI1-201ENST00000244050 A0A1W2PR77 199 aa11.87□□□□□ -0.51
SNAI1-201ENST00000244050 FUOMA2VDF0 154 aa11.87□□□□□ -0.51
SNAI1-201ENST00000244050 TAF4O00268 1085 aa11.87□□□□□ -0.51
SNAI1-201ENST00000244050 CCRL2O00421 344 aa11.87□□□□□ -0.51
SNAI1-201ENST00000244050 CSF2P04141 144 aa11.87□□□□□ -0.51
SNAI1-201ENST00000244050 UGT2B7P16662 529 aa11.87□□□□□ -0.51
SNAI1-201ENST00000244050 BUD31P41223 144 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms