RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MECP2P51608 486 aaKnown RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 KIAA1024LP59773 190 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 RNF151Q2KHN1 245 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 EXOSC6Q5RKV6 272 aaKnown RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 HIST1H2AAQ96QV6 131 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 COPZ2Q9P299 210 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 OSGIN1Q9UJX0 560 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 PFKMP08237 780 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 NME2P22392 152 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 PBX2P40425 430 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 TATDN3Q17R31 274 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 LBX2Q6XYB7 198 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 KCTD20Q7Z5Y7 419 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 VRK2Q86Y07 508 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 DBF4BQ8NFT6 615 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 TFAP2CQ92754 450 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 FRZBQ92765 325 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 TIFAQ96CG3 184 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 IFT52Q9Y366 437 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SRP9P49458 86 aaKnown RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 SIM1P81133 766 aaPredicted RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 ERV3-1Q14264 604 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SLC5A12Q1EHB4 618 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ZNF691Q5VV52 312 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ATG9BQ674R7 924 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SLC24A5Q71RS6 500 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 THSD1Q9NS62 852 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 BDH1Q02338 343 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 C22orf39Q6P5X5 142 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 CD163Q86VB7 1156 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 HINT2Q9BX68 163 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 BTBD1Q9H0C5 482 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 NAV1Q8NEY1 1877 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 HIVEP3Q5T1R4 2406 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 HSPA12AO43301 675 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 UBXN7O94888 489 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ADH1AP07327 375 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SNTA1Q13424 505 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ZNF169Q14929 603 aaPredicted RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 TMIGD1Q6UXZ0 262 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 GTPBP8Q8N3Z3 284 aaPredicted RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 OR7G1Q8NGA0 311 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 METTL21AQ8WXB1 218 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 THAP4Q8WY91 577 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 OR51J1Q9H342 316 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 H7C1C5 153 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 LEFTY1O75610 366 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 LCN6P62502 163 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 FCN2Q15485 313 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 UBQLNLQ8IYU4 475 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 PNLDC1Q8NA58 520 aaKnown RBP7.14□□□□□ -1.27
RIF1-201ENST00000243326 EPYCQ99645 322 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 H2BFMP0C1H6 154 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 PIGAP37287 484 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ZNF750Q32MQ0 723 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 RFLNAQ6ZTI6 216 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 CEP68Q76N32 757 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 FAM109AQ8N4B1 249 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 A0A1B0GVI7 797 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 JUNDP17535 347 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 GSTM3P21266 225 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 AHRP35869 848 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ARL3P36405 182 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ALDH3B1P43353 468 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 SLC9A3R2Q15599 337 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 LRRTM4Q86VH4 590 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 NPAS4Q8IUM7 802 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 C16orf78Q8WTQ4 265 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 HERVK_113Q902F9 699 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 RADILQ96JH8 1075 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 ALG8Q9BVK2 526 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 WDR26Q9H7D7 661 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 HCSTQ9UBK5 93 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 CORINQ9Y5Q5 1042 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 AKAP12Q02952 1782 aa7.14□□□□□ -1.27
RIF1-201ENST00000243326 TRAPPC6AO75865 159 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 SYPP08247 313 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 HCCSP53701 268 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 EGLN3Q9H6Z9 239 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 TMEM45AQ9NWC5 275 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 MYADML2A6NDP7 307 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 COCHO43405 550 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 RPA2P15927 270 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 APEX1P27695 318 aaKnown RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 SLC11A1P49279 550 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ZNF836Q6ZNA1 936 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ISCA2Q86U28 154 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 OR52P1PQ8NH57 321 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 NTPCRQ9BSD7 190 aaKnown RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 TINAGL1Q9GZM7 467 aaPredicted RBP7.13□□□□□ -1.27
RIF1-201ENST00000243326 SCML2Q9UQR0 700 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 TIA1P31483 386 aaKnown RBP eCLIP7.13□□□□□ -1.272e-6■■■□□ 17.7
RIF1-201ENST00000243326 PIANPQ8IYJ0 282 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ARL14Q8N4G2 192 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 TOR1AIP2Q8NFQ8 470 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CWH43Q9H720 699 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 ACOT13Q9NPJ3 140 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 PCDHB16Q9NRJ7 776 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 CHD4Q14839 1912 aa7.13□□□□□ -1.27
RIF1-201ENST00000243326 A0A0B4J203 849 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms