RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 A3GALT2U3KPV4 340 aa15.8■□□□□ 0.12
SSPN-201ENST00000242729 A0A1W2PQU0 124 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 GSAPA4D1B5 854 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 EIF2S1P05198 315 aaKnown RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 KRT8P05787 483 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 CCNYL3P0C7X3 344 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 APEX1P27695 318 aaKnown RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 TRIM23P36406 574 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 MTNR1AP48039 350 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 RACK1P63244 317 aaKnown RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 TEKQ02763 1124 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TGM3Q08188 693 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 ARHGAP19Q14CB8 494 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 CCDC85BQ15834 202 aaPredicted RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 SLC27A4Q6P1M0 643 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 OR2L3Q8NG85 312 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 PIK3R3Q92569 461 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 CDS1Q92903 461 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TP53INP1Q96A56 240 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 DHRS1Q96LJ7 313 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 PRRC1Q96M27 445 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 SLC38A1Q9H2H9 487 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 PLEKHB1Q9UF11 243 aaPredicted RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 SDK1Q7Z5N4 2213 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3DA0A087WVF3 549 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3IA0A087WXS9 549 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3EA0A087X179 549 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3KA0A087X1G2 549 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3FA6NER0 549 aaPredicted RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3LB9A6J9 549 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 CEACAM5P06731 702 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3HP0C7X1 549 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 SMSP52788 366 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 GPR68Q15743 365 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 DEFB134Q4QY38 66 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 ATAD3CQ5T2N8 411 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 AGAP6Q5VW22 663 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 MEDAGQ5VYS4 303 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3GQ6DHY5 549 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3CQ6IPX1 549 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 ZNF517Q6ZMY9 492 aaPredicted RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 FAM92BQ6ZTR7 304 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 TBC1D3Q8IZP1 549 aaPredicted RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 ZNF513Q8N8E2 541 aaPredicted RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 ATP6V1C2Q8NEY4 427 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 OR4Q3Q8NH05 313 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 NECTIN4Q96NY8 510 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 AGAP4Q96P64 663 aa15.79■□□□□ 0.12
SSPN-201ENST00000242729 POLDIP3Q9BY77 421 aaKnown RBP15.79■□□□□ 0.12
SSPN-201ENST00000242729 SOCS6O14544 535 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 CLEC3AO75596 197 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 ZNF888P0CJ79 500 aaPredicted RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 NR2F6P10588 404 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 RGS8P57771 180 aaPredicted RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 CSTF1Q05048 431 aaKnown RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 MLLT11Q13015 90 aaPredicted RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 SRSF5Q13243 272 aaKnown RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 ENTPD8Q5MY95 495 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 TMEM201Q5SNT2 666 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 C1orf94Q6P1W5 598 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 SFTPA2Q8IWL1 248 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 FAM26EQ8N5C1 309 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 OR10G6Q8NH81 332 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 RASSF5Q8WWW0 418 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 HDAC8Q9BY41 377 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 FGF22Q9HCT0 170 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 PLSCR3Q9NRY6 295 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 TESQ9UGI8 421 aaKnown RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 DIMT1Q9UNQ2 313 aaKnown RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 SHISA3A0PJX4 238 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 CARNS1A5YM72 827 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 POM121BA6NF01 834 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 CASKO14936 926 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 THY1P04216 161 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 ALPPP05187 535 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 PRG2P13727 222 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 AHRP35869 848 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 SLC16A1P53985 500 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 CDH11P55287 796 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 WNT4P56705 351 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 RAB25P57735 213 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 SMIM11AP58511 58 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 CDK5Q00535 292 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 PDZK1Q5T2W1 519 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 ZC3H14Q6PJT7 736 aaKnown RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 PLEKHM3Q6ZWE6 761 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 TRIM69Q86WT6 500 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 RAB42Q8N4Z0 105 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 ZNF784Q8NCA9 323 aaPredicted RBP15.78■□□□□ 0.12
SSPN-201ENST00000242729 KATNB1Q9BVA0 655 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 SRRQ9GZT4 340 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 PCBD2Q9H0N5 130 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 CLCA2Q9UQC9 943 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 N6AMT1Q9Y5N5 214 aa15.78■□□□□ 0.12
SSPN-201ENST00000242729 CDC42EP2O14613 210 aa15.77■□□□□ 0.12
SSPN-201ENST00000242729 LIMS3P0CW19 117 aa15.77■□□□□ 0.12
SSPN-201ENST00000242729 LIMS4P0CW20 117 aa15.77■□□□□ 0.12
SSPN-201ENST00000242729 CSNK2A2P19784 350 aaPredicted RBP15.77■□□□□ 0.12
SSPN-201ENST00000242729 HTR3AP46098 478 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms