RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 EOGTQ5NDL2 527 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 FAM111BQ6SJ93 734 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 KIAA1324Q6UXG2 1013 aaKnown RBP15.13■□□□□ 0.01
UBE3D-201ENST00000237186 PLEKHG7Q6ZR37 379 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 ABHD13Q7L211 337 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 DGLUCYQ7Z3D6 616 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 PRICKLE2Q7Z3G6 844 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 BCDIN3DQ7Z5W3 292 aaKnown RBP15.13■□□□□ 0.01
UBE3D-201ENST00000237186 TMEM163Q8TC26 289 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 LRR1Q96L50 414 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 SEC14L4Q9UDX3 406 aa15.13■□□□□ 0.01
UBE3D-201ENST00000237186 IRGMA1A4Y4 181 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 UPK1BO75841 260 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 OR5F1O95221 314 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 CCNYL3P0C7X3 344 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 CPMP14384 443 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 PORP16435 677 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ALOX12P18054 663 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 POLR2CP19387 275 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 TRHRP34981 398 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 SOX6P35712 828 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 SNAPC1Q16533 368 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF181Q2M3W8 571 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 SLC27A4Q6P1M0 643 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 CLIP4Q8N3C7 705 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 OR52I1Q8NGK6 324 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 GPBAR1Q8TDU6 330 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ACOT11Q8WXI4 607 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ZFYVE21Q9BQ24 234 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 NEURL2Q9BR09 285 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 PRR14Q9BWN1 585 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 PLA2G12AQ9BZM1 189 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 C6orf62Q9GZU0 229 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 SAP130Q9H0E3 1048 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 IL21RQ9HBE5 538 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 FGF20Q9NP95 211 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 CTPS2Q9NRF8 586 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 POT1Q9NUX5 634 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF232Q9UNY5 417 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 C19orf53Q9UNZ5 99 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 A0A087WV62 115 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 KRBA1A5PL33 1030 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 OR6C74A6NCV1 312 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 FAM170BA6NMN3 283 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 SNTNA6NMZ2 147 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 PRODHO43272 600 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 KLF4O43474 513 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 HBQ1P09105 142 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 CKMT1AP12532 417 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 FPR3P25089 353 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 PSMA1P25786 263 aaKnown RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 S100A5P33763 92 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 STAT5AP42229 794 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 CRYBB2P43320 205 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 RAB40BQ12829 278 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ILF3Q12906 894 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■■■□ 22.3
UBE3D-201ENST00000237186 DUSP8Q13202 625 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 PUS10Q3MIT2 529 aaKnown RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF628Q5EBL2 1059 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 C3orf38Q5JPI3 329 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 COL13A1Q5TAT6 717 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 FHL5Q5TD97 284 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 TYW3Q6IPR3 259 aaKnown RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF730Q6ZMV8 503 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ABI3BPQ7Z7G0 1075 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 SNX29P2Q8IUI4 249 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 BAHD1Q8TBE0 780 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 PIGXQ8TBF5 258 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 TEX47Q8TBZ9 253 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 MSLNLQ96KJ4 702 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 NECTIN4Q96NY8 510 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 PIGUQ9H490 435 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 NDUFB11Q9NX14 153 aa15.12■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF443Q9Y2A4 671 aaPredicted RBP15.12■□□□□ 0.01
UBE3D-201ENST00000237186 AP3D1O14617 1153 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 FRS3O43559 492 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 DNAJB6O75190 326 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 UBXN7O94888 489 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 SNX4O95219 450 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 RAB36O95755 333 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 THBS1P07996 1170 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 LTBRP36941 435 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 RABIFP47224 123 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 CD97P48960 835 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 RGS8P57771 180 aaPredicted RBP15.11■□□□□ 0.01
UBE3D-201ENST00000237186 UBE2IP63279 158 aaKnown RBP15.11■□□□□ 0.01
UBE3D-201ENST00000237186 C1DQ13901 141 aaKnown RBP15.11■□□□□ 0.01
UBE3D-201ENST00000237186 TCEA2Q15560 299 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 Q6ZSR6 202 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 RNF44Q7L0R7 432 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 ZCCHC10Q8TBK6 192 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 COL26A1Q96A83 441 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 SDF2Q99470 211 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 PRRG3Q9BZD7 231 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 POLR2J2Q9GZM3 115 aaKnown RBP15.11■□□□□ 0.01
UBE3D-201ENST00000237186 IL20Q9NYY1 176 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 WDR45Q9Y484 360 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 XIRP2A4UGR9 3374 aa15.11■□□□□ 0.01
UBE3D-201ENST00000237186 UNC80Q8N2C7 3258 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 LOC105369274A0A096LPK9 316 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms