RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 KLHL21Q9UJP4 597 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 MRPS23Q9Y3D9 190 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 ATG4BQ9Y4P1 393 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 PTPRSQ13332 1948 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 LAMA2P24043 3122 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 ERI3O43414 337 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 NFATC1O95644 943 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 IGHA1P01876 353 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 CSF2P04141 144 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 EPCAMP16422 314 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 CSNK2A2P19784 350 aaPredicted RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 ATP5A1P25705 553 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 PRKAR1BP31321 381 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 SSTR4P31391 388 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 MPIP34949 423 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 EVX1P49640 407 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 MAP4K2Q12851 820 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 WSCD2Q2TBF2 565 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 PIP5KL1Q5T9C9 394 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 ZNF697Q5TEC3 545 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 TIGD3Q6B0B8 471 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 SLC48A1Q6P1K1 146 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 MZT2AQ6P582 158 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 ABHD17CQ6PCB6 329 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 UTS2BQ765I0 119 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 MEX3DQ86XN8 651 aaKnown RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 CCDC116Q8IYX3 515 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 KLHL36Q8N4N3 616 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 ACOT4Q8N9L9 421 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 DUSP18Q8NEJ0 188 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 TOR1AIP2Q8NFQ8 470 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 OR2L8Q8NGY9 312 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 OR8K5Q8NH50 307 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 ACOT11Q8WXI4 607 aaPredicted RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 RSPRY1Q96DX4 576 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 C12orf66Q96MD2 445 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 RIPOR3Q96MK2 946 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 ATF6BQ99941 703 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 TEX101Q9BY14 249 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 TRIM45Q9H8W5 580 aaPredicted RBP12.48□□□□□ -0.41
SRP54-201ENST00000216774 KLHL28Q9NXS3 571 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 IL20Q9NYY1 176 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 CES1P1Q9UKY3 287 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 KCNE3Q9Y6H6 103 aa12.48□□□□□ -0.41
SRP54-201ENST00000216774 SMIM30A4D0T7 59 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 IGLON5A6NGN9 336 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 CPSF4LA6NMK7 179 aaKnown RBP12.47□□□□□ -0.41
SRP54-201ENST00000216774 LRRTM2O43300 516 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 AIFM1O95831 613 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 CCNYL3P0C7X3 344 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 PRKAR1AP10644 381 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 APEX1P27695 318 aaKnown RBP12.47□□□□□ -0.41
SRP54-201ENST00000216774 AHRP35869 848 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 CD79BP40259 229 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 TSFMP43897 325 aaKnown RBP12.47□□□□□ -0.41
SRP54-201ENST00000216774 ZNF155Q12901 538 aaPredicted RBP12.47□□□□□ -0.41
SRP54-201ENST00000216774 CEBPEQ15744 281 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 MLF2Q15773 248 aaPredicted RBP12.47□□□□□ -0.41
SRP54-201ENST00000216774 GAB4Q2WGN9 574 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 CLEC12AQ5QGZ9 265 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 SHFQ7M4L6 423 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 OR2L5Q8NG80 312 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 GRPEL2Q8TAA5 225 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 UBASH3BQ8TF42 649 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 SUSD6Q92537 303 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 FYTTD1Q96QD9 318 aaKnown RBP12.47□□□□□ -0.41
SRP54-201ENST00000216774 INSM2Q96T92 566 aaPredicted RBP12.47□□□□□ -0.41
SRP54-201ENST00000216774 GIMAP4Q9NUV9 329 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 ADAM30Q9UKF2 790 aa12.47□□□□□ -0.41
SRP54-201ENST00000216774 GPR55Q9Y2T6 319 aaPredicted RBP12.47□□□□□ -0.41
SRP54-201ENST00000216774 GSAPA4D1B5 854 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 A6NL46 340 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 C4orf51C9J302 202 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 KLF4O43474 513 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 HPGDSO60760 199 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 LALBAP00709 142 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 ALPPL2P10696 532 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 ACP5P13686 325 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 F3P13726 295 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 GNSP15586 552 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 PKLRP30613 574 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 HTR1FP30939 366 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 SOX18P35713 384 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 TRIM23P36406 574 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 CAV3P56539 151 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 HOXC5Q00444 222 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 CHRNEQ04844 493 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 DUSP2Q05923 314 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 ZNF750Q32MQ0 723 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 UAP1L1Q3KQV9 507 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 YIF1BQ5BJH7 314 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 ZNF438Q7Z4V0 828 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 ZFP41Q8N8Y5 198 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 SRFBP1Q8NEF9 429 aaKnown RBP12.46□□□□□ -0.41
SRP54-201ENST00000216774 OR4Q3Q8NH05 313 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 NEIL3Q8TAT5 605 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 DNAJA4Q8WW22 397 aaPredicted RBP12.46□□□□□ -0.41
SRP54-201ENST00000216774 ZNF649Q9BS31 505 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms