RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 MITFO75030 526 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 CYBAP13498 195 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 STT3AP46977 705 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 GTDC1Q4AE62 458 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 FAM69BQ5VUD6 431 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 SLC39A5Q6ZMH5 540 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ZDHHC1Q8WTX9 485 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 BADQ92934 168 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 HYLS1Q96M11 299 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 LTN1O94822 1766 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ATG12O94817 140 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 PNMTP11086 282 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 DDCP20711 480 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 CD40LGP29965 261 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF789Q5FWF6 425 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 SERPINA11Q86U17 422 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 SYT14Q8NB59 555 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 OR5AK2Q8NH90 309 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 MRI1Q9BV20 369 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 SLC6A16Q9GZN6 736 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 CPNE5Q9HCH3 593 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ADAMTS5Q9UNA0 930 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 UBE2J1Q9Y385 318 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 PCDHA9Q9Y5H5 950 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 MYADML2A6NDP7 307 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 CENPBD1B2RD01 187 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 LILRB3O75022 631 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF43P17038 809 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 SLC6A8P48029 635 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ECH1Q13011 328 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ELOAQ14241 798 aaKnown RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ARHGAP19Q14CB8 494 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 PAGE3Q5JUK9 113 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 GSG1LQ6UXU4 331 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 TRIM46Q7Z4K8 759 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 IL17RCQ8NAC3 791 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ADAMTS19Q8TE59 1207 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 TM9SF4Q92544 642 aa12.85□□□□□ -0.35
SF3A1-201ENST00000215793 PAQR5Q9NXK6 330 aaPredicted RBP12.85□□□□□ -0.35
SF3A1-201ENST00000215793 ARNTLO00327 626 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 ACY1Q03154 408 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 ARSJQ5FYB0 599 aaPredicted RBP12.84□□□□□ -0.35
SF3A1-201ENST00000215793 ZSCAN1Q8NBB4 408 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 OR6C4Q8NGE1 309 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 FRS2Q8WU20 508 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 TREX2Q9BQ50 279 aaPredicted RBP12.84□□□□□ -0.35
SF3A1-201ENST00000215793 PINK1Q9BXM7 581 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 FAM86C1Q9NVL1 165 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 FANCGO15287 622 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 S100PP25815 95 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 ARL3P36405 182 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 MS4A2Q01362 244 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 DSC1Q08554 894 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 OR5AR1Q8NGP9 310 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 DNAJA3Q96EY1 480 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 ZNF285Q96NJ3 590 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 INPP5KQ9BT40 448 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 NTMT1Q9BV86 223 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 TMEM181Q9P2C4 612 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 NLKQ9UBE8 527 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.84□□□□□ -0.35
SF3A1-201ENST00000215793 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.84□□□□□ -0.35
SF3A1-201ENST00000215793 C12orf71A8MTZ7 269 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 TMEM189-UBE2V1I3L0A0 370 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 OR2T1O43869 369 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 ITGB7P26010 798 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 CRABP1P29762 137 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 GRIN2CQ14957 1233 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 UEVLDQ8IX04 471 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 RBM12BQ8IXT5 1001 aaKnown RBP12.84□□□□□ -0.35
SF3A1-201ENST00000215793 DOK4Q8TEW6 326 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 CHPT1Q8WUD6 406 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 C16orf58Q96GQ5 468 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 SAMD8Q96LT4 415 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 DCAF13Q9NV06 445 aaKnown RBP12.84□□□□□ -0.35
SF3A1-201ENST00000215793 KCNIP1Q9NZI2 227 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 ASB4Q9Y574 426 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 DRGXA6NNA5 263 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 B8ZZF3 427 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 PLATP00750 562 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 IFNGR1P15260 489 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 SDC1P18827 310 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 S100A12P80511 92 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 CDK5R2Q13319 367 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 LRP8Q14114 963 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 KIR2DS3Q14952 304 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 TMEM151BQ8IW70 566 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 TTC9BQ8N6N2 239 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 KLHL15Q96M94 604 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 RGCCQ9H4X1 137 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 DMRT3Q9NQL9 472 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 GJD2Q9UKL4 321 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 ERVK-19Q9WJR5 959 aa12.84□□□□□ -0.35
SF3A1-201ENST00000215793 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms