RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GABRB1P18505 474 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 DCKP27707 260 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 FMO3P31513 532 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 GCGRP47871 477 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 OR1D5P58170 312 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 HSD11B2P80365 405 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 ZXDAP98168 799 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 ALDH6A1Q02252 535 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 COX10Q12887 443 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 BNIP3Q12983 259 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 LARS2Q15031 903 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 EIPR1Q53HC9 387 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 DCST2Q5T1A1 773 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 NKAIN2Q5VXU1 208 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 PODNL1Q6PEZ8 512 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 WDR74Q6RFH5 385 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 PRSS42Q7Z5A4 293 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 GALNT12Q8IXK2 581 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF619Q8N2I2 560 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 D2HGDHQ8N465 521 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 MORN4Q8NDC4 146 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 TOR1AIP2Q8NFQ8 470 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 SGCDQ92629 289 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 DIO2Q92813 273 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 GTPBP3Q969Y2 492 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 NMD3Q96D46 503 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 MVB12AQ96EY5 273 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC41A2Q96JW4 573 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 SIGLEC11Q96RL6 698 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 PELOQ9BRX2 385 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 LMF2Q9BU23 707 aaKnown RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 EVA1AQ9H8M9 152 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 PRTFDC1Q9NRG1 225 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 TMEM9Q9P0T7 183 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 SUSD2Q9UGT4 822 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 NDOR1Q9UHB4 597 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 EYSQ5T1H1 3165 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 TGFBR3LH3BV60 316 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 KIAA0513O60268 411 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 OR10H3O60404 316 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 MPZL2O60487 215 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 DBIP07108 87 aaKnown RBP13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 PCMT1P22061 227 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 CHMP24386 653 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 UGT2B15P54855 530 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 EEF1A1P68104 462 aaKnown RBP13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 CFHR1Q03591 330 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC13A2Q13183 592 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 LSAMPQ13449 338 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 PTGES3Q15185 160 aaKnown RBP13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 NEDD8Q15843 81 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 Q6ZPB1 254 aaPredicted RBP13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 KANSL1Q7Z3B3 1105 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 GALNT15Q8N3T1 639 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 COX18Q8N8Q8 333 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 MUL1Q969V5 352 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 PEX11GQ96HA9 241 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 POLR2J2Q9GZM3 115 aaKnown RBP13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 SPRTNQ9H040 489 aaPredicted RBP13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 POLR2J3Q9H1A7 115 aaKnown RBP13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 FANCEQ9HB96 536 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 NLGN3Q9NZ94 848 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 MKLN1Q9UL63 735 aa13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 GPR55Q9Y2T6 319 aaPredicted RBP13.33□□□□□ -0.27
RTFDC1-201ENST00000023939 TP53BP1Q12888 1972 aaPredicted RBP13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 THADAQ6YHU6 1953 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 TRIM64BA6NI03 449 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 TTC36A6NLP5 189 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 PTGES3LE9PB15 166 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 TPST2O60704 377 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 POU2F1P14859 743 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 PNLIPP16233 465 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 CD1CP29017 333 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 SLC5A2P31639 672 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 IFNA8P32881 189 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 KRT20P35900 424 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 STT3AP46977 705 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 STX4Q12846 297 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 SQSTM1Q13501 440 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 EXOSC7Q15024 291 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 TRAM2Q15035 370 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 C1orf94Q6P1W5 598 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 TSSK4Q6SA08 328 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 DGAT2L6Q6ZPD8 337 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 HMGN2P46Q86SG4 172 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 CLIP4Q8N3C7 705 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 C7orf57Q8NEG2 295 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 OR4K5Q8NGD3 323 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 RIT1Q92963 219 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 UBE2FQ969M7 185 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 MMABQ96EY8 250 aaPredicted RBP13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 RBM18Q96H35 190 aaKnown RBP13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 ALOXE3Q9BYJ1 711 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 ZNF226Q9NYT6 803 aa13.33□□□□□ -0.28
RTFDC1-201ENST00000023939 TOX3O15405 576 aaPredicted RBP13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 BRINP1O60477 761 aa13.32□□□□□ -0.28
RTFDC1-201ENST00000023939 FAM20BO75063 409 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms