RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RIPK2O43353 540 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 HCRTR2O43614 444 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 ZNF708P17019 499 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 DDCP20711 480 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 DNASE1P24855 282 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 HMOX2P30519 316 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 HTR6P50406 440 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 CLDN18P56856 261 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 CORO7P57737 925 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 MRPS22P82650 360 aaKnown RBP14.4□□□□□ -0.1
ERCC1-201ENST00000013807 PSG6Q00889 435 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 FOXF2Q12947 444 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 ERCC6LQ2NKX8 1250 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 AAGABQ6PD74 315 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 PAMR1Q6UXH9 720 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 OR7G2Q8NG99 324 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 OR9A2Q8NGT5 310 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 FAM76AQ8TAV0 307 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 MZB1Q8WU39 189 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 KAT2AQ92830 837 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 CCDC126Q96EE4 140 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 METTL2AQ96IZ6 378 aaKnown RBP14.4□□□□□ -0.1
ERCC1-201ENST00000013807 DACH2Q96NX9 599 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 PIGMQ9H3S5 423 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 GSTO2Q9H4Y5 243 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 ANKRA2Q9H9E1 313 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 FOLH1BQ9HBA9 442 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 DCDC2Q9UHG0 476 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 FBXL2Q9UKC9 423 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 GRID1Q9ULK0 1009 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 HEATR5AQ86XA9 2040 aa14.4□□□□□ -0.1
ERCC1-201ENST00000013807 CLCA1A8K7I4 914 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 A8MXE2 369 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 PLOD2O00469 737 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 PSMG1O95456 288 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 CRHP06850 196 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 FOSL1P15407 271 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 AGFG1P52594 562 aaKnown RBP14.39□□□□□ -0.11
ERCC1-201ENST00000013807 B3GALT5-AS1P59052 145 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 CYP27C1Q4G0S4 372 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 SH2D5Q6ZV89 423 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 LARP4Q71RC2 724 aaKnown RBP eCLIP14.39□□□□□ -0.11
ERCC1-201ENST00000013807 TRIM46Q7Z4K8 759 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 FADS6Q8N9I5 356 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 EXOSC8Q96B26 276 aaKnown RBP14.39□□□□□ -0.11
ERCC1-201ENST00000013807 DLL4Q9NR61 685 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 GIMAP4Q9NUV9 329 aa14.39□□□□□ -0.11
ERCC1-201ENST00000013807 C19orf53Q9UNZ5 99 aaPredicted RBP14.39□□□□□ -0.11
ERCC1-201ENST00000013807 NUP214P35658 2090 aaPredicted RBP14.38□□□□□ -0.11
ERCC1-201ENST00000013807 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
ERCC1-201ENST00000013807 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 NPIPB8E9PQR5 432 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 G3V2L1 256 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 UBFD1O14562 309 aaKnown RBP14.38□□□□□ -0.11
ERCC1-201ENST00000013807 TNFSF13O75888 250 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 RAF1P04049 648 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 ANXA4P09525 319 aaPredicted RBP14.38□□□□□ -0.11
ERCC1-201ENST00000013807 KLK2P20151 261 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 GRK2P25098 689 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 KRT20P35900 424 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 DGKQP52824 942 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 DSCR4P56555 118 aaPredicted RBP14.38□□□□□ -0.11
ERCC1-201ENST00000013807 OCRLQ01968 901 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 ZNF763Q0D2J5 394 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 FAM71E1Q6IPT2 247 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 IFT20Q8IY31 132 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 FAM9CQ8IZT9 166 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 LINC01560Q8TB33 94 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 SMPDL3BQ92485 455 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 ABCG2Q9UNQ0 655 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 TIMM22Q9Y584 194 aa14.38□□□□□ -0.11
ERCC1-201ENST00000013807 EEF1E1-BLOC1S5C9J1V9 151 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 H0Y3Z8 333 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 LINC01387J3KSC0 135 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 EEF1E1O43324 174 aaKnown RBP14.37□□□□□ -0.11
ERCC1-201ENST00000013807 FADS1O60427 444 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 COQ9O75208 318 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 NME6O75414 186 aaPredicted RBP14.37□□□□□ -0.11
ERCC1-201ENST00000013807 ATE1O95260 518 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 HRGP04196 525 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 DPP4P27487 766 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 IL12BP29460 328 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 STARP49675 285 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 FOXA1P55317 472 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 PRSS53Q2L4Q9 553 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 SLC44A2Q8IWA5 706 aaPredicted RBP14.37□□□□□ -0.11
ERCC1-201ENST00000013807 OR2L13Q8N349 312 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 OR4N2Q8NGD1 307 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 HOXB13Q92826 284 aaPredicted RBP14.37□□□□□ -0.11
ERCC1-201ENST00000013807 RBM24Q9BX46 236 aaKnown RBP14.37□□□□□ -0.11
ERCC1-201ENST00000013807 MID1IP1Q9NPA3 183 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 MYNNQ9NPC7 610 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 PFDN4Q9NQP4 134 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 GALNT8Q9NY28 637 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 PSMC3IPQ9P2W1 217 aaPredicted RBP14.37□□□□□ -0.11
ERCC1-201ENST00000013807 EMCNQ9ULC0 261 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 PLEKHA6Q9Y2H5 1048 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 DSCAMO60469 2012 aa14.37□□□□□ -0.11
ERCC1-201ENST00000013807 ROS1P08922 2347 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms