RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 GPR4P46093 362 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 REEP5Q00765 189 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 TNFRSF17Q02223 184 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 VEZF1Q14119 521 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 TRIM63Q969Q1 353 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 WBP2Q969T9 261 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 SCGB3A2Q96PL1 93 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 UTP23Q9BRU9 249 aaKnown RBP9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 TM7SF3Q9NS93 570 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 SEC14L4Q9UDX3 406 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 VDAC3Q9Y277 283 aa9.77□□□□□ -0.85
NIPAL3-201ENST00000003912 GABRR3A8MPY1 467 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ADAP00813 363 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 PEPDP12955 493 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 OR1D5P58170 312 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ADOQ96SZ5 270 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 PCDH10Q9P2E7 1040 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 H0YAE9 185 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 H3BML4 177 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 SULT2B1O00204 365 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 FANCGO15287 622 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 JRKO75564 520 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ABOP16442 354 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ETV4P43268 484 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ZXDBP98169 803 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 TRAM1Q15629 374 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 C3orf38Q5JPI3 329 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 METRNLQ641Q3 311 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 GLT8D1Q68CQ7 371 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 SYT13Q7L8C5 426 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 SLITRK4Q8IW52 837 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 FAM160A2Q8N612 972 aaPredicted RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 SLC37A2Q8TED4 501 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 PMM1Q92871 262 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 LYSMD1Q96S90 227 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 PITX2Q99697 317 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 UBQLN4Q9NRR5 601 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 MMACHCQ9Y4U1 282 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CDH10Q9Y6N8 788 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ECM29Q5VYK3 1845 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 A0A1W2PPC4 97 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 A6NIZ1 184 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ATE1O95260 518 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 PKLRP30613 574 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CTXN1P60606 82 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 RAP1BP61224 184 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 RAP1AP62834 184 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 EXOSC7Q15024 291 aaKnown RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 PYCR3Q53H96 274 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 NRMQ8IXM6 262 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CDS1Q92903 461 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 UBXN10Q96LJ8 280 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CDH20Q9HBT6 801 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM9BQ9NQ34 198 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 COL5A3P25940 1745 aaPredicted RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 OR5K3A6NET4 321 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 PLRG1O43660 514 aaKnown RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 AIFM1O95831 613 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 IRF2P14316 349 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 AZGP1P25311 298 aaKnown RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 DAP3P51398 398 aaKnown RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 RIDAP52758 137 aaKnown RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ACTA2P62736 377 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ACTG2P63267 376 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ERV3-1Q14264 604 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 GK3PQ14409 553 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 MEP1AQ16819 746 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CPZQ66K79 652 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 LCN8Q6JVE9 175 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 IL17RCQ8NAC3 791 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 NAXEQ8NCW5 288 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 OR4K5Q8NGD3 323 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 IFI44Q8TCB0 444 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 TESCQ96BS2 214 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 FRMD6Q96NE9 622 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 C2orf42Q9NWW7 574 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 SPHK1Q9NYA1 384 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 TMPRSS11EQ9UL52 423 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 GALR3O60755 368 aaPredicted RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 INMTO95050 263 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 NDUFB2O95178 105 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 C7P10643 843 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CAPN3P20807 821 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ENTPD1P49961 510 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CBX3Q13185 183 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 RPS26P11Q5JNZ5 115 aaPredicted RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ASB18Q6ZVZ8 466 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 UBE2Q1Q7Z7E8 422 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CCDC74AQ96AQ1 378 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF578Q96N58 590 aaPredicted RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CNN2Q99439 309 aaKnown RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 LMF2Q9BU23 707 aaKnown RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 CD93Q9NPY3 652 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 ETAA1Q9NY74 926 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 INTS6Q9UL03 887 aaKnown RBP9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 GRIP1Q9Y3R0 1128 aa9.76□□□□□ -0.85
NIPAL3-201ENST00000003912 LHCGRP22888 699 aa9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 NAA10P41227 235 aaPredicted RBP9.75□□□□□ -0.85
NIPAL3-201ENST00000003912 SSR4P51571 173 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms