RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Rdh1Q8CGV4 317 aa11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Zc3h10Q8R205 435 aaKnown RBP11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Blzf1Q8R2X8 403 aa11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Q91W34 466 aa11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Dcbld2Q91ZV3 769 aa11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Tex19.2Q9D5S1 317 aa11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Slco1a4Q9EP96 670 aa11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Pla2g12aQ9EPR2 192 aa11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Acox1Q9R0H0 661 aaKnown RBP11.97□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Pgm2A2CEK3 580 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Gm436B1AVU6 407 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Olfr605E9Q838 314 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Vmn1r20K7N778 303 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 ItgamP05555 1153 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 AcadmP45952 421 aaKnown RBP11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Cdk5P49615 292 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Msto1Q2YDW2 556 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Hp1bp3Q3TEA8 554 aaKnown RBP11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 TfptQ3U1J1 259 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Vwa5b2Q3UR50 1248 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Zfp791Q497V9 528 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Szrd1Q6NXN1 152 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 DmknQ6P253 517 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Olfr1275Q7TQY8 312 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Tmem108Q8BHE4 574 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Smyd4Q8BTK5 799 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Tmem163Q8C996 288 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Padi6Q8K3V4 682 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Mat1aQ91X83 396 aaKnown RBP11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 9030624G23RikQ9D308 155 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Pbld1Q9DCG6 288 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Lgi1Q9JIA1 557 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Gm9573F7C950 1606 aa11.96□□□□□ -0.49
Rnf4-201ENSMUST00000030992 Vmn1r177E9PXM3 309 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 FurinP23188 793 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Hyal4Q05A56 481 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 SctQ08535 133 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Tmprss11cQ1JRP2 431 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Uap1l1Q3TW96 507 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Eri2Q5BKS4 688 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 PmlQ60953 885 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Lasp1Q61792 263 aaKnown RBP11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Ttf1Q62187 859 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Thnsl2Q80W22 483 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Supv3l1Q80YD1 779 aaKnown RBP11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Slitrk5Q810B7 957 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Slc5a8Q8BYF6 611 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Casc3Q8K3W3 698 aaKnown RBP11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Bloc1s5Q8R015 185 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Olfr935Q8VG16 308 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Olfr791Q8VGJ0 312 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Olfr166Q8VGX2 312 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Lrch4Q921G6 680 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 SostQ99P68 211 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Eral1Q9CZU4 437 aaKnown RBP11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Phf6Q9D4J7 364 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 CalyQ9DCA7 226 aa11.96□□□□□ -0.5
Rnf4-201ENSMUST00000030992 CN725425A0A087WRU1 652 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Olfr1034A0A1L1ST14 310 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Gm6619F6URP1 175 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 ClppO88696 272 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Gsta1P13745 223 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Ubl4aP21126 157 aaKnown RBP11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 GhrhrP32082 423 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Cfl2P45591 166 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Sox3P53784 375 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Gsta1Q6P8Q0 223 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Rsbn1Q80T69 795 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Acsm4Q80W40 580 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Krr1Q8BGA5 380 aaKnown RBP11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Ptpn7Q8BUM3 359 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 ZxdcQ8C8V1 858 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Mfsd6Q8CBH5 775 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Cpne5Q8JZW4 593 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Sdr9c7Q8K3P0 313 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 FevQ8QZW2 237 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Art3Q8R2G4 371 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Slc35c2Q8VCX2 364 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Elf5Q8VDK3 253 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Izumo2Q9DA16 220 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Prl8a1Q9DAV8 240 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Adat1Q9JHI2 499 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Lmx1aQ9JKU8 382 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Exo1Q9QZ11 837 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 HaspinQ9Z0R0 754 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Olfr544E9PX47 334 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Olfr171G5E8J1 314 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 NgpO08692 167 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Fpr-s1O08790 351 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Kif1cO35071 1100 aaKnown RBP11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Best1O88870 551 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Il2raP01590 268 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 ArafP04627 604 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Atp1b1P14094 304 aaKnown RBP11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Cbx3P23198 183 aaKnown RBP11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Ucp3P56501 308 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Kdm4dQ3U2K5 510 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Kbtbd8Q3UQV5 599 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Cd53Q61451 219 aa11.95□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Abcg1Q64343 666 aa11.95□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms