RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 VPS50Q96JG6 964 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 MAP3K3Q99759 626 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ACTRT3Q9BYD9 372 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 YTHDF1Q9BYJ9 559 aaKnown RBP16.08■□□□□ 0.16
PHGDH-234ENST00000642041 SEMA6AQ9H2E6 1030 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 SIRT3Q9NTG7 399 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-234ENST00000642041 SOHLH2Q9NX45 425 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 SMPD3Q9NY59 655 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-234ENST00000642041 AKAP7Q9P0M2 348 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-234ENST00000642041 C3orf18Q9UK00 162 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 ERVK-11Q9UQG0 969 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 TP53TG5Q9Y2B4 290 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 KLHL20Q9Y2M5 609 aa16.08■□□□□ 0.16
PHGDH-234ENST00000642041 CELSR1Q9NYQ6 3014 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 LOC105369274A0A096LPK9 316 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 LOC102723532A0A0G2JNH3 316 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 PLOD3O60568 738 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 COQ9O75208 318 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 E2F6O75461 281 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 SLC35E2P0CK97 266 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 ETFAP13804 333 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 CPMP14384 443 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 DNAJA1P31689 397 aaKnown RBP16.07■□□□□ 0.16
PHGDH-234ENST00000642041 AQP4P55087 323 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 HSD17B7P56937 341 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 PCBP3P57721 371 aaKnown RBP16.07■□□□□ 0.16
PHGDH-234ENST00000642041 EEF1A2Q05639 463 aaKnown RBP16.07■□□□□ 0.16
PHGDH-234ENST00000642041 C16orf72Q14CZ0 275 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 SFT2D3Q587I9 215 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 PHF19Q5T6S3 580 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 C1QL3Q5VWW1 255 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 CCDC116Q8IYX3 515 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 OR4N4Q8N0Y3 316 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 D2HGDHQ8N465 521 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 LINC00471Q8N535 108 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 Q8N9G6 341 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-234ENST00000642041 OIT3Q8WWZ8 545 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 C10orf90Q96M02 699 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 MS4A4EQ96PG1 132 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 TAAR9Q96RI9 348 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 CIB1Q99828 191 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 REEP1Q9H902 201 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 GPATCH2Q9NW75 528 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 NAALAD2Q9Y3Q0 740 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 PCDHGA3Q9Y5H0 932 aa16.07■□□□□ 0.16
PHGDH-234ENST00000642041 SNRNP200O75643 2136 aaKnown RBP16.06■□□□□ 0.16
PHGDH-234ENST00000642041 A0A0G2JN53 185 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 M0QX08 132 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 PGRMC2O15173 223 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 DYRK3O43781 588 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 TPST1O60507 370 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 CTNSO60931 367 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 CLDN1O95832 211 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 TFPTP0C1Z6 253 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 ANKRD34CP0C6C1 535 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 NR2F1P10589 423 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 CCL4P13236 92 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 FPR1P21462 350 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 OR1D5P58170 312 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 ACY1Q03154 408 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 RUNX2Q13950 521 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 C18orf63Q68DL7 685 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 TMEM71Q6P5X7 295 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 TMPRSS9Q7Z410 1059 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 CLEC4FQ8N1N0 589 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 CA13Q8N1Q1 262 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 DHRSXQ8N5I4 330 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 NUP43Q8NFH3 380 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 ZCCHC10Q8TBK6 192 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 PNPT1Q8TCS8 783 aaKnown RBP16.06■□□□□ 0.16
PHGDH-234ENST00000642041 ADAMTS15Q8TE58 950 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 KLHL6Q8WZ60 621 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 PROX1Q92786 737 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 TGM7Q96PF1 710 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 TRNT1Q96Q11 434 aaKnown RBP16.06■□□□□ 0.16
PHGDH-234ENST00000642041 OR1F2PQ96R84 312 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 ARMC7Q9H6L4 198 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 RUBCNLQ9H714 662 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 POLE3Q9NRF9 147 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 DDX18Q9NVP1 670 aaKnown RBP16.06■□□□□ 0.16
PHGDH-234ENST00000642041 GMPR2Q9P2T1 348 aaKnown RBP16.06■□□□□ 0.16
PHGDH-234ENST00000642041 OAZ3Q9UMX2 235 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 MMACHCQ9Y4U1 282 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 AP4B1Q9Y6B7 739 aa16.06■□□□□ 0.16
PHGDH-234ENST00000642041 EFCAB7A8K855 629 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 CYR61O00622 381 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 P2RX6O15547 441 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 PGM3O95394 542 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 ALBP02768 609 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 SEMG1P04279 462 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 RPSAP08865 295 aaKnown RBP16.05■□□□□ 0.16
PHGDH-234ENST00000642041 HBQ1P09105 142 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 PRKAR1AP10644 381 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 PVRP15151 417 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 ITGA1P56199 1179 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 PSPHP78330 225 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 HPCAP84074 193 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 CDC20Q12834 499 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 IL18R1Q13478 541 aa16.05■□□□□ 0.16
PHGDH-234ENST00000642041 DAG1Q14118 895 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms