RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 OR4D11Q8NGI4 311 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 GPR151Q8TDV0 419 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 NR1H4Q96RI1 486 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-209ENST00000641074 RBM4BQ9BQ04 359 aaKnown RBP16.98■□□□□ 0.31
PHGDH-209ENST00000641074 WFDC6Q9BQY6 131 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 ADI1Q9BV57 179 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 CNPPD1Q9BV87 410 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 RBM4Q9BWF3 364 aaKnown RBP16.98■□□□□ 0.31
PHGDH-209ENST00000641074 APMAPQ9HDC9 416 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 MKKSQ9NPJ1 570 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-209ENST00000641074 UBAP1Q9NZ09 502 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 USE1Q9NZ43 259 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 MKLN1Q9UL63 735 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 PCDHGB3Q9Y5G1 929 aa16.98■□□□□ 0.31
PHGDH-209ENST00000641074 ADAMDEC1O15204 470 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 DNAJB5O75953 348 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 EPPINO95925 133 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PABPC4LP0CB38 370 aaKnown RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 TNNI3P19429 210 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 CSTF2P33240 577 aaKnown RBP eCLIP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 GABRA3P34903 492 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 ARHGDIAP52565 204 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 NUBP1P53384 320 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 FUT7Q11130 342 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 TRA2AQ13595 282 aaKnown RBP eCLIP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 DCST2Q5T1A1 773 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 TYW3Q6IPR3 259 aaKnown RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 CARM1Q86X55 608 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PPP1R3BQ86XI6 285 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 RBM45Q8IUH3 476 aaKnown RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 CHERPQ8IWX8 916 aaKnown RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 COX18Q8N8Q8 333 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 CHDHQ8NE62 594 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 VANGL1Q8TAA9 524 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 NRBF2Q96F24 287 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF578Q96N58 590 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 EPYCQ99645 322 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PIP5K1AQ99755 562 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 FOLH1BQ9HBA9 442 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 CTSFQ9UBX1 484 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 SATB2Q9UPW6 733 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 ERVK-19Q9WJR5 959 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 FAM32AQ9Y421 112 aaKnown RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 WDR45Q9Y484 360 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PCDHGB5Q9Y5G0 923 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 HEMK1Q9Y5R4 338 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 RALGAPA1Q6GYQ0 2036 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 EFCAB7A8K855 629 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 C17orf105B2RV13 164 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 NKX2-2O95096 273 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 ALPPP05187 535 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF806P0C7X5 589 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 CD59P13987 128 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 RHCEP18577 417 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 SPIBQ01892 262 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF311Q5JNZ3 666 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 LAPTM4BQ86VI4 370 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 VRK2Q86Y07 508 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 LACC1Q8IV20 430 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PRSS58Q8IYP2 241 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PTPMT1Q8WUK0 201 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 GATA6Q92908 595 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 CLIP3Q96DZ5 547 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 VSTM2LQ96N03 204 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 LMF2Q9BU23 707 aaKnown RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PINK1Q9BXM7 581 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 GABARAPL1Q9H0R8 117 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 MTHFD2LQ9H903 347 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PNO1Q9NRX1 252 aaKnown RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 RXFP3Q9NSD7 469 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 PDP1Q9P0J1 537 aaPredicted RBP16.97■□□□□ 0.31
PHGDH-209ENST00000641074 LYVE1Q9Y5Y7 322 aa16.97■□□□□ 0.31
PHGDH-209ENST00000641074 NUP210LQ5VU65 1888 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 COL5A1P20908 1838 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF318Q5VUA4 2279 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 GXYLT2A0PJZ3 443 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 EIF4E1BA6NMX2 242 aaKnown RBP16.96■□□□□ 0.31
PHGDH-209ENST00000641074 TNFRSF11BO00300 401 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 GDF9O60383 454 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 PRAMEF2O60811 474 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 SEMA7AO75326 666 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 LGI1O95970 557 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 UBTFL6P0CB48 400 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-209ENST00000641074 THRBP10828 461 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 PSG6Q00889 435 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 ZIK1Q3SY52 487 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-209ENST00000641074 SLC36A3Q495N2 470 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 TCTN3Q6NUS6 607 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF605Q86T29 641 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 CTRCQ99895 268 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 ANKRD60Q9BZ19 345 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 ZNF350Q9GZX5 532 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 OR10A5Q9H207 317 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 SOX17Q9H6I2 414 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-209ENST00000641074 FBXO34Q9NWN3 711 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 DTX4Q9Y2E6 619 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 HCN4Q9Y3Q4 1203 aa16.96■□□□□ 0.31
PHGDH-209ENST00000641074 NINQ8N4C6 2090 aa16.95■□□□□ 0.3
PHGDH-209ENST00000641074 A8MUA0 341 aa16.95■□□□□ 0.3
PHGDH-209ENST00000641074 M0R3H8 397 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms