RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554		G3V3Y1	287 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	CCL21	O00585	134 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	BCKDK	O14874	412 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	EMC8	O43402	210 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	ESRRA	P11474	423 aa	Predicted RBP	13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	IL12B	P29460	328 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	MASP1	P48740	699 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	PSG6	Q00889	435 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	ZNF155	Q12901	538 aa	Predicted RBP	13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	HSPB3	Q12988	150 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	PTGR1	Q14914	329 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	DECR1	Q16698	335 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	PRAMEF20	Q5VT98	475 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	C1QL3	Q5VWW1	255 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	OGFOD2	Q6N063	350 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	RPTN	Q6XPR3	784 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	ZNF551	Q7Z340	670 aa	Predicted RBP	13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	SPATA19	Q7Z5L4	167 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	CAMKMT	Q7Z624	323 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	CDRT4	Q8N9R6	151 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	OR52N2	Q8NGI0	321 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	PSMA8	Q8TAA3	256 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	FAM57A	Q8TBR7	257 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	HGD	Q93099	445 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	TMBIM1	Q969X1	311 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	ARL8A	Q96BM9	186 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	MOAP1	Q96BY2	351 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	ZBTB9	Q96C00	473 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	RILP	Q96NA2	401 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	SH3GL2	Q99962	352 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	LMF2	Q9BU23	707 aa	Known RBP	13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	C1orf50	Q9BV19	199 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	DEFB127	Q9H1M4	99 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	PNPO	Q9NVS9	261 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554	LRRK2	Q5S007	2527 aa		13.08	□□□□□ -0.32
SDHD-209	ENST00000640554		A0A0G2JMM0	328 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554		A0A1B0GTH9	108 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554		A0A1W2PPB8	328 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554		A0A1W2PRS3	328 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	FAM166B	A8MTA8	275 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	KIR3DP1	A8MWS1	328 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554		E9PLN8	166 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	AQP7	O14520	342 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	CDC40	O60508	579 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	TSPAN2	O60636	221 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	WISP2	O76076	250 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	HOXD4	P09016	255 aa	Predicted RBP	13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	LAMP1	P11279	417 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	G6PD	P11413	515 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	AGA	P20933	346 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	LCN1	P31025	176 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	MAGEA5	P43359	124 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	CLNS1A	P54105	237 aa	Known RBP	13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	CORO7	P57737	925 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	OCRL	Q01968	901 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	NNAT	Q16517	81 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	DPY19L1	Q2PZI1	675 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	ZNF385B	Q569K4	471 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	TIGD3	Q6B0B8	471 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	ANKRD26P1	Q6NSI1	321 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	BHLHB9	Q6PI77	547 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	TRIL	Q7L0X0	811 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	FJX1	Q86VR8	437 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	CHERP	Q8IWX8	916 aa	Known RBP	13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	PRR22	Q8IZ63	422 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	VPS37A	Q8NEZ2	397 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	NUP43	Q8NFH3	380 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	OR7A2P	Q8NGA2	310 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	PHF10	Q8WUB8	498 aa	Known RBP	13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	ZNF75CP	Q92670	426 aa	Predicted RBP	13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	HOXB13	Q92826	284 aa	Predicted RBP	13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	SARAF	Q96BY9	339 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	MS4A4E	Q96PG1	132 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	ADO	Q96SZ5	270 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	VKORC1	Q9BQB6	163 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	DUSP26	Q9BV47	211 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	NUF2	Q9BZD4	464 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	ACBD3	Q9H3P7	528 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	LDAH	Q9H6V9	325 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	ANKRA2	Q9H9E1	313 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	NEUROD4	Q9HD90	331 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	GIN1	Q9NXP7	522 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	GIMAP2	Q9UG22	337 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	CBLC	Q9ULV8	474 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	PCDHGB3	Q9Y5G1	929 aa		13.07	□□□□□ -0.32
SDHD-209	ENST00000640554	TRGV5	A0A0B4J1U4	118 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	PRAMEF25	A6NGN4	478 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	ICOSLG	O75144	302 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	UGT2B11	O75310	529 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	CBR3	O75828	277 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	KCNH1	O95259	989 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	KRT16	P08779	473 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	GP1BB	P13224	206 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	MAN2A2	P49641	1150 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	PRIM2	P49643	509 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	CLK3	P49761	638 aa	Known RBP	13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	SMS	P52788	366 aa		13.06	□□□□□ -0.32
SDHD-209	ENST00000640554	GAB1	Q13480	694 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms