RNA–Protein interactions for RNA: ENST00000639507.1

AP000550.4-201, humanhuman

TSL 3 BASIC

Gene AP000550.4, Length 358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.4-201ENST00000639507 NEIL2Q969S2 332 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 NCLNQ969V3 563 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 FAM136AQ96C01 138 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 FBXL8Q96CD0 374 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 ARSGQ96EG1 525 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 MFSD3Q96ES6 412 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 PDLIM5Q96HC4 596 aaKnown RBP2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 SMIM10Q96HG1 83 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 VPS39Q96JC1 886 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 ZFP3Q96NJ6 502 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 DACH2Q96NX9 599 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 SERINC2Q96SA4 455 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 GPR21Q99679 349 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 MACROD1Q9BQ69 325 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 PELOQ9BRX2 385 aaKnown RBP2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 NAT9Q9BTE0 207 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 TBCDQ9BTW9 1192 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 TRIM5Q9C035 493 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 ATG10Q9H0Y0 220 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 KLK15Q9H2R5 256 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 RHBGQ9H310 441 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 PIGMQ9H3S5 423 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 LIME1Q9H400 295 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 EHD1Q9H4M9 534 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 NT5DC2Q9H857 520 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 PLEKHF2Q9H8W4 249 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 COPS7BQ9H9Q2 264 aaPredicted RBP2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 PELI2Q9HAT8 420 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 BCO1Q9HAY6 547 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 XAB2Q9HCS7 855 aaKnown RBP2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 LYRM4Q9HD34 91 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 FANCFQ9NPI8 374 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 DMRT3Q9NQL9 472 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 NECTIN3Q9NQS3 549 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 DEPPQ9NTK1 212 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 C20orf96Q9NUD7 363 aaPredicted RBP2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 MS4A12Q9NXJ0 267 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 GALPQ9UBC7 116 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 FETUBQ9UGM5 382 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 FBXO5Q9UKT4 447 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 CORO1CQ9ULV4 474 aaPredicted RBP2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 R3HDM2Q9Y2K5 976 aaKnown RBP2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 IKBKGQ9Y6K9 419 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 CSMD2Q7Z408 3487 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 ABCA2Q9BZC7 2435 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 SETD2Q9BYW2 2564 aaPredicted RBP2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 POLEQ07864 2286 aa2.33□□□□□ -2.04
AP000550.4-201ENST00000639507 C2CD3Q4AC94 2353 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 TACC2O95359 2948 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 POLQO75417 2590 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 C15orf38-AP3S2A0A0A6YYH1 394 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 IQANK1A0A1B0GTG1 560 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 ZCWPW2A0A1B0GU75 182 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 TCRBV7S2A1N4TA0A589 114 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CCDC151A5D8V7 595 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 LRIT2A6NDA9 550 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 MBD3L4A6NDZ8 208 aaPredicted RBP2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 MBD3L3A6NE82 208 aaPredicted RBP2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 MBD3L5A6NJ08 208 aaPredicted RBP2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 C17orf105B2RV13 164 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 EEF1E1-BLOC1S5C9J1V9 151 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 GOLGA8KD6RF30 607 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CDC7O00311 574 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CLGNO14967 610 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 EEF1E1O43324 174 aaKnown RBP2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 ERI3O43414 337 aaKnown RBP2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 PRAMEF4O60810 478 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CRLF1O75462 422 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CBR3O75828 277 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 TRAPPC6AO75865 159 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 FTCDO95954 541 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 ACTL6AO96019 429 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 AHSGP02765 367 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 STATHP02808 62 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 HRGP04196 525 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 HPNP05981 417 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CRHP06850 196 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 FESP07332 822 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CCDC175P0C221 793 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CYP4B1P13584 511 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 ETS1P14921 441 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CPN1P15169 458 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 NAGAP17050 411 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 GDF1P27539 372 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 SERPINB1P30740 379 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 GALNSP34059 522 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 PIGAP37287 484 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 HNF4AP41235 474 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 SLC1A2P43004 574 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 MSH2P43246 934 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 MAGEA6P43360 314 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CPA2P48052 419 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 MASP1P48740 699 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 ZNF81P51508 661 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 ARFIP1P53367 373 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 PLA2G16P53816 162 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 LIM2P55344 173 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 OLR1P78380 273 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 CDKL1Q00532 357 aa2.32□□□□□ -2.04
AP000550.4-201ENST00000639507 REEP5Q00765 189 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms