RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SLC44A2Q8IWA5 706 aaPredicted RBP16.18■□□□□ 0.18
PNKP-230ENST00000638016 ULK2Q8IYT8 1036 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 CNPY4Q8N129 248 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 RIBC1Q8N443 379 aaPredicted RBP16.18■□□□□ 0.18
PNKP-230ENST00000638016 ACBD4Q8NC06 268 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 LILRB4Q8NHJ6 448 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 CIDECQ96AQ7 238 aaPredicted RBP16.18■□□□□ 0.18
PNKP-230ENST00000638016 EFHD2Q96C19 240 aaPredicted RBP16.18■□□□□ 0.18
PNKP-230ENST00000638016 ADOQ96SZ5 270 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 IQCGQ9H095 443 aaKnown RBP16.18■□□□□ 0.18
PNKP-230ENST00000638016 LRTM1Q9HBL6 345 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 SERHLQ9NQF3 203 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 FLRT3Q9NZU0 649 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 MID2Q9UJV3 735 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 DNAJC15Q9Y5T4 150 aa16.18■□□□□ 0.18
PNKP-230ENST00000638016 H3BQF6 201 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 SNPHO15079 494 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 AKAP10O43572 662 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 PLOD3O60568 738 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 TSPAN2O60636 221 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 WDR1O75083 606 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 SLU7O95391 586 aaKnown RBP16.17■□□□□ 0.18
PNKP-230ENST00000638016 HPNP05981 417 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 NAGAP17050 411 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 SDC1P18827 310 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 TCEA1P23193 301 aaKnown RBP16.17■□□□□ 0.18
PNKP-230ENST00000638016 PTGER4P35408 488 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 NAA20P61599 178 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 DCAF7P61962 342 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 RPL38P63173 70 aaKnown RBP16.17■□□□□ 0.18
PNKP-230ENST00000638016 RPP38P78345 283 aaKnown RBP16.17■□□□□ 0.18
PNKP-230ENST00000638016 PSG6Q00889 435 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 RFTN2Q52LD8 501 aaPredicted RBP16.17■□□□□ 0.18
PNKP-230ENST00000638016 ARL13AQ5H913 290 aaPredicted RBP16.17■□□□□ 0.18
PNKP-230ENST00000638016 SH2D4BQ5SQS7 431 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 ACAD11Q709F0 780 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 ZNF551Q7Z340 670 aaPredicted RBP16.17■□□□□ 0.18
PNKP-230ENST00000638016 WDSUB1Q8N9V3 476 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 NAXEQ8NCW5 288 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 FAM83FQ8NEG4 500 aaPredicted RBP16.17■□□□□ 0.18
PNKP-230ENST00000638016 OR1J4Q8NGS1 313 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 ASB5Q8WWX0 329 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 CAVIN3Q969G5 261 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 AMDHD1Q96NU7 426 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 COL21A1Q96P44 957 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 TSSK3Q96PN8 268 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 TIMP4Q99727 224 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 ENKD1Q9H0I2 346 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 C1orf109Q9NX04 203 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 BAIAP2L1Q9UHR4 511 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 PCNX3Q9H6A9 2034 aa16.17■□□□□ 0.18
PNKP-230ENST00000638016 UPK1AO00322 258 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 SLC28A1O00337 649 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 PIP5K1BO14986 540 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 BMP7P18075 431 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 EFNA1P20827 205 aaPredicted RBP16.16■□□□□ 0.18
PNKP-230ENST00000638016 PRPH2P23942 346 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 MPIP34949 423 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 GSTM5P46439 218 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 UGT3A2Q3SY77 523 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 GALNTL6Q49A17 601 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 CES4AQ5XG92 561 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 OR5M10Q6IEU7 315 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 WDR93Q6P2C0 686 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 EMBQ6PCB8 327 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 PLXDC2Q6UX71 529 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 SAMD14Q8IZD0 417 aaPredicted RBP16.16■□□□□ 0.18
PNKP-230ENST00000638016 FAM76AQ8TAV0 307 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 TWIST2Q8WVJ9 160 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 FCRL1Q96LA6 429 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 UGT2B28Q9BY64 529 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 RYDENQ9NUL5 291 aaKnown RBP16.16■□□□□ 0.18
PNKP-230ENST00000638016 FBXL2Q9UKC9 423 aa16.16■□□□□ 0.18
PNKP-230ENST00000638016 OR6C70A6NIJ9 312 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 NPIPB8E9PQR5 432 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 LSM1O15116 133 aaKnown RBP16.15■□□□□ 0.18
PNKP-230ENST00000638016 RGS14O43566 566 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 BCAS2O75934 225 aaPredicted RBP16.15■□□□□ 0.18
PNKP-230ENST00000638016 NTSP30990 170 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 HSPB3Q12988 150 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 SNTB1Q13884 538 aaKnown RBP16.15■□□□□ 0.18
PNKP-230ENST00000638016 ACSF3Q4G176 576 aaPredicted RBP16.15■□□□□ 0.18
PNKP-230ENST00000638016 SLC30A6Q6NXT4 461 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 TMEM81Q6P7N7 255 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 LARP4Q71RC2 724 aaKnown RBP eCLIP16.15■□□□□ 0.18
PNKP-230ENST00000638016 DDIASQ8IXT1 998 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 NUDT8Q8WV74 236 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 ERP27Q96DN0 273 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 SLC35A4Q96G79 324 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 PKNOX2Q96KN3 472 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 PARD6BQ9BYG5 372 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 RTN4RQ9BZR6 473 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 TAS2R7Q9NYW3 318 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 PDZD2O15018 2839 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 DOCK7Q96N67 2140 aa16.15■□□□□ 0.18
PNKP-230ENST00000638016 ZNF500O60304 480 aaPredicted RBP16.14■□□□□ 0.17
PNKP-230ENST00000638016 NPHS1O60500 1241 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 PSMG1O95456 288 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 CYP4B1P13584 511 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 IGFBP2P18065 325 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms