RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 OR9K2Q8NGE7 335 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 CMTM2Q8TAZ6 248 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 ACER1Q8TDN7 264 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 DPM1O60762 260 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 CAP1Q01518 475 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 RFWD3Q6PCD5 774 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 TEPSINQ96N21 525 aa18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 LSM5Q9Y4Y9 91 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-257ENST00000638009 LOC102725191A0A1B0GVB3 256 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 ITM2AO43736 263 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 EBLN1P0CF75 366 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 PNMTP11086 282 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 UBL4AP11441 157 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 UBE2NLQ5JXB2 153 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 ATPAF1Q5TC12 328 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 DCP2Q8IU60 420 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 ZNF461Q8TAF7 563 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 ARSGQ96EG1 525 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 DERL2Q9GZP9 239 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 PMM2O15305 246 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 MGST1P10620 155 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 MC3RP41968 323 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 FAM205BPQ63HN1 556 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 KDF1Q8NAX2 398 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 OR5AK3PQ8NH89 298 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 PAQR8Q8TEZ7 354 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 GON7Q9BXV9 100 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 MFFQ9GZY8 342 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 ISYNA1Q9NPH2 558 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 SIRPGQ9P1W8 387 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 CHRNA9Q9UGM1 479 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 PCDHA2Q9Y5H9 948 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 MSTNO14793 375 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 CSTAP01040 98 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 ATP1B2P14415 290 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 PPT1P50897 306 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 SLAMF9Q96A28 289 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 EXO1Q9UQ84 846 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 MRPL42Q9Y6G3 142 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 GAPDHSO14556 408 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 LRIG1Q96JA1 1093 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 SEC22CQ9BRL7 303 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 SLC39A9Q9NUM3 307 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 TO15178 435 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 DSC2Q02487 901 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 PROX2Q3B8N5 592 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 PRSS58Q8IYP2 241 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 OR5AK2Q8NH90 309 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 TUBAL3A6NHL2 446 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 IRF4Q15306 451 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 FAM96BQ9Y3D0 163 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 FKBP1AP62942 108 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 MAP2K5Q13163 448 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 IRF2BP2Q7Z5L9 587 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 SLC51AQ86UW1 340 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 WDR6Q9NNW5 1121 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 KCNMB3Q9NPA1 279 aa18.47■□□□□ 0.55
CACNA1A-257ENST00000638009 SAMD7Q7Z3H4 446 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 ST7LQ8TDW4 575 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 SLC2A4RGQ9NR83 387 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 A0A096LPI6 279 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 CYTIPO60759 359 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 HEPHL1Q6MZM0 1159 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 TMPRSS9Q7Z410 1059 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 APBB3O95704 486 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 GLO1Q04760 184 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 PLPP4Q5VZY2 271 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 XKR5Q6UX68 686 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 GDPD4Q6W3E5 623 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 SSX7Q7RTT5 188 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 TRMT2BQ96GJ1 504 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 C1orf123Q9NWV4 160 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 MSI1O43347 362 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 LRCH4O75427 683 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 RBMS1P29558 406 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 ZNF417Q8TAU3 575 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 MGLLQ99685 303 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 NT5DC2Q9H857 520 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 TGFBR3Q03167 851 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 CNN3Q15417 329 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 CD300LGQ6UXG3 332 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 XYLT1Q86Y38 959 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 OR1F2PQ96R84 312 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 ZFP37Q9Y6Q3 630 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 ZMAT1Q5H9K5 638 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 ERCC6L2Q5T890 1561 aa18.46■□□□□ 0.55
CACNA1A-257ENST00000638009 ENPP3O14638 875 aa18.46■□□□□ 0.54
CACNA1A-257ENST00000638009 GCGRP47871 477 aa18.46■□□□□ 0.54
CACNA1A-257ENST00000638009 SOX2P48431 317 aa18.46■□□□□ 0.54
CACNA1A-257ENST00000638009 NR0B1P51843 470 aaKnown RBP18.46■□□□□ 0.54
CACNA1A-257ENST00000638009 GRB2P62993 217 aaKnown RBP18.46■□□□□ 0.54
CACNA1A-257ENST00000638009 SFRP5Q5T4F7 317 aa18.46■□□□□ 0.54
CACNA1A-257ENST00000638009 ZNRF4Q8WWF5 429 aa18.46■□□□□ 0.54
CACNA1A-257ENST00000638009 SOX17Q9H6I2 414 aaPredicted RBP18.46■□□□□ 0.54
CACNA1A-257ENST00000638009 F2RP25116 425 aa18.45■□□□□ 0.54
CACNA1A-257ENST00000638009 EPGNQ6UW88 154 aa18.45■□□□□ 0.54
CACNA1A-257ENST00000638009 CKMT2P17540 419 aa18.45■□□□□ 0.54
CACNA1A-257ENST00000638009 RBCK1Q9BYM8 510 aa18.45■□□□□ 0.54
CACNA1A-257ENST00000638009 A0A1W2PQL4 384 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-257ENST00000638009 MROH6A6NGR9 719 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms