RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 ZNF721Q8TF20 911 aa19.59■□□□□ 0.73
CLN8-213ENST00000637156 FBXL20Q96IG2 436 aa19.59■□□□□ 0.73
CLN8-213ENST00000637156 SDF2Q99470 211 aa19.59■□□□□ 0.73
CLN8-213ENST00000637156 LMF2Q9BU23 707 aaKnown RBP19.59■□□□□ 0.73
CLN8-213ENST00000637156 DDA1Q9BW61 102 aa19.59■□□□□ 0.73
CLN8-213ENST00000637156 OR8D2Q9GZM6 311 aa19.59■□□□□ 0.73
CLN8-213ENST00000637156 SLC38A1Q9H2H9 487 aa19.59■□□□□ 0.73
CLN8-213ENST00000637156 C3orf18Q9UK00 162 aa19.59■□□□□ 0.73
CLN8-213ENST00000637156 GPC6Q9Y625 555 aaPredicted RBP19.59■□□□□ 0.73
CLN8-213ENST00000637156 GVINP1Q7Z2Y8 2422 aa19.59■□□□□ 0.73
CLN8-213ENST00000637156 A0A0G2JPF8 293 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 HNRNPCL2B2RXH8 293 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 HNRNPCL3B7ZW38 293 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 CASQ2O14958 399 aaPredicted RBP19.58■□□□□ 0.73
CLN8-213ENST00000637156 PRAMEF2O60811 474 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 ALOX12BO75342 701 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 NKX2-2O95096 273 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 IFNA14P01570 189 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 HNRNPCL4P0DMR1 293 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 LRRC36Q1X8D7 754 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 CYP27C1Q4G0S4 372 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 C16orf62Q7Z3J2 963 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 SLC2A12Q8TD20 617 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 COL21A1Q96P44 957 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 IL1RAPQ9NPH3 570 aa19.58■□□□□ 0.73
CLN8-213ENST00000637156 IGHV3-20A0A0C4DH32 117 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 CAPNS1P04632 268 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 CT45A8P0DMV1 189 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 CT45A9P0DMV2 189 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 SLC5A2P31639 672 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 TARDBPQ13148 414 aaKnown RBP eCLIP19.58■□□□□ 0.72
CLN8-213ENST00000637156 TRIP10Q15642 601 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 IQCCQ4KMZ1 466 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 CT45A2Q5DJT8 189 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 CCNJQ5T5M9 372 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 TIPARPQ7Z3E1 657 aaKnown RBP19.58■□□□□ 0.72
CLN8-213ENST00000637156 ANKRD37Q7Z713 158 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 OR4N2Q8NGD1 307 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 DAZLQ92904 295 aaKnown RBP19.58■□□□□ 0.72
CLN8-213ENST00000637156 C7orf34Q96L11 122 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 ZNF607Q96SK3 696 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 QRSL1Q9H0R6 528 aaKnown RBP19.58■□□□□ 0.72
CLN8-213ENST00000637156 WDR54Q9H977 334 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 FBXO34Q9NWN3 711 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 SATB2Q9UPW6 733 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 PCDHGA3Q9Y5H0 932 aa19.58■□□□□ 0.72
CLN8-213ENST00000637156 GXYLT2A0PJZ3 443 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 PRAMEF25A6NGN4 478 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 DYRK3O43781 588 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 KLF7O75840 302 aaPredicted RBP19.57■□□□□ 0.72
CLN8-213ENST00000637156 ETS2P15036 469 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 CSRP1P21291 193 aaKnown RBP19.57■□□□□ 0.72
CLN8-213ENST00000637156 MAGEA2P43356 314 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 GPR143P51810 404 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 ZNF155Q12901 538 aaPredicted RBP19.57■□□□□ 0.72
CLN8-213ENST00000637156 C3orf38Q5JPI3 329 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 PRAMEF8Q5VWM4 474 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 PRAMEF7Q5VXH5 474 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 FAM198BQ6UWH4 519 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 HMGN2P46Q86SG4 172 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 CHDHQ8NE62 594 aaPredicted RBP19.57■□□□□ 0.72
CLN8-213ENST00000637156 WDR36Q8NI36 951 aaKnown RBP19.57■□□□□ 0.72
CLN8-213ENST00000637156 BBS10Q8TAM1 723 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 MKLN1Q9UL63 735 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 PCDHGB3Q9Y5G1 929 aa19.57■□□□□ 0.72
CLN8-213ENST00000637156 DLL1O00548 723 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 SERPINB7O75635 380 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 PDE9AO76083 593 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 TNFRSF1BP20333 461 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 PEX2P28328 305 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 VLDLRP98155 873 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 ATP6AP1Q15904 470 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 NPSR1Q6W5P4 371 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 MARCH9Q86YJ5 346 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 ARMC8Q8IUR7 673 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 COX18Q8N8Q8 333 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 ZSCAN1Q8NBB4 408 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 GPR32P1Q8NGA4 272 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 OR14A16Q8NHC5 309 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 METTL21AQ8WXB1 218 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 LZICQ8WZA0 190 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 CRB3Q9BUF7 120 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 NUDT9Q9BW91 350 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 NTN4Q9HB63 628 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 GPN3Q9UHW5 284 aaPredicted RBP19.56■□□□□ 0.72
CLN8-213ENST00000637156 PADI1Q9ULC6 663 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 DSPPQ9NZW4 1301 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 CCDC88CQ9P219 2028 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 CLOCKO15516 846 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 PRKNO60260 465 aaPredicted RBP19.56■□□□□ 0.72
CLN8-213ENST00000637156 FCGR1AP12314 374 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 CD247P20963 164 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 OR1E2P47887 323 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 PUM1Q14671 1186 aaKnown RBP eCLIP19.56■□□□□ 0.72
CLN8-213ENST00000637156 SFT2D3Q587I9 215 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 DCST2Q5T1A1 773 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 WLSQ5T9L3 541 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 TYW3Q6IPR3 259 aaKnown RBP19.56■□□□□ 0.72
CLN8-213ENST00000637156 TMEM205Q6UW68 189 aa19.56■□□□□ 0.72
CLN8-213ENST00000637156 FRRS1Q6ZNA5 592 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms