RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ITGA10O75578 1167 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 CREG1O75629 220 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 FADS2O95864 444 aaKnown RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 NUDT3O95989 172 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PGK1P00558 417 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 CRHP06850 196 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MELTFP08582 738 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 F7P08709 466 aaPredicted RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 UBCP0CG48 685 aaKnown RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 HSPD1P10809 573 aaKnown RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 IRF1P10914 325 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 SLC2A1P11166 492 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 VPREB1P12018 145 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ACADSP16219 412 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 CD36P16671 472 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ZNF37AP17032 561 aaPredicted RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 PSMC3P17980 439 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PGAM1P18669 254 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 FDXRP22570 491 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 GLRA1P23415 457 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MMP11P24347 488 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 STOMP27105 288 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PSMB5P28074 263 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 CASP14P31944 242 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MPIP34949 423 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PCK1P35558 622 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 NUDT1P36639 197 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 AVPR1AP37288 418 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PBX1P40424 430 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 AQP2P41181 271 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MAP3K8P41279 467 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 NPBWR2P48146 333 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 GLRBP48167 497 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TMED10P49755 219 aaKnown RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 RGS6P49758 472 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 RPL14P50914 215 aaKnown RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 CCL11P51671 97 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 GPR143P51810 404 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ZNF75DP51815 510 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 HNRNPMP52272 730 aaKnown RBP eCLIP2.79□□□□□ -1.96
VIM-210ENST00000637053 UCNP55089 124 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 FOXL2P58012 376 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TAS2R50P59544 299 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 KRTAP10-6P60371 365 aaPredicted RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 HERV-K104P63124 156 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MYL7Q01449 175 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 NAAAQ02083 359 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 GABPAQ06546 454 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 RBBP4Q09028 425 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PJVKQ0ZLH3 352 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 STX4Q12846 297 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 DPYSL3Q14195 570 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 KRT33BQ14525 404 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MTF1Q14872 753 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ARL6IP1Q15041 203 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 LTB4RQ15722 352 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 EFNB3Q15768 340 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 EIF2S3LQ2VIR3 472 aaKnown RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 TMEM249Q2WGJ8 235 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TRIM16LQ309B1 348 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MGAT5BQ3V5L5 792 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 COX19Q49B96 90 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PTPN20Q4JDL3 420 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 LACTB2Q53H82 288 aaPredicted RBP2.79□□□□□ -1.96
VIM-210ENST00000637053 PIGGQ5H8A4 983 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 C6orf226Q5I0X4 101 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 EMC4Q5J8M3 183 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ACER2Q5QJU3 275 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 C6orf10Q5SRN2 563 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 SERTAD4-AS1Q5TG53 156 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MEDAGQ5VYS4 303 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 LYSMD4Q5XG99 296 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 SLC22A10Q63ZE4 541 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TMEM225Q6GV28 225 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 OR2A2Q6IF42 318 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 OR52W1Q6IF63 320 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 CCDC144NLQ6NUI1 221 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 REEP3Q6NUK4 255 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 RHBDF2Q6PJF5 856 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 LRRN1Q6UXK5 716 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ZNF562Q6V9R5 426 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 NPSR1Q6W5P4 371 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 CERS6Q6ZMG9 384 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 DEF8Q6ZN54 512 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 IL17RELQ6ZVW7 336 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 MOB3CQ70IA8 216 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 NIPA1Q7RTP0 329 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 OTOP2Q7RTS6 562 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TSPAN33Q86UF1 283 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 GPAT4Q86UL3 456 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 SLC22A16Q86VW1 577 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 HORMAD1Q86X24 394 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 PDSS2Q86YH6 399 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 LAX1Q8IWV1 398 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ADHFE1Q8IWW8 467 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.79□□□□□ -1.96
VIM-210ENST00000637053 ZNF34Q8IZ26 560 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 ADGRF3Q8IZF5 1079 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 HS3ST5Q8IZT8 346 aa2.79□□□□□ -1.96
VIM-210ENST00000637053 TMEM123Q8N131 208 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms